RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 GOLGA8BA8MQT2 603 aa18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 PPP1R11O60927 126 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 ASGR1P07306 291 aa18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 SMPD1P17405 629 aa18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 EIF2AK2P19525 551 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 CASTP20810 708 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 CPT1AP50416 773 aa18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 FSCN1Q16658 493 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 C1orf53Q5VUE5 145 aa18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 TMTC3Q6ZXV5 915 aa18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 RAB11FIP4Q86YS3 637 aa18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 CCDC82Q8N4S0 544 aa18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 SRBD1Q8N5C6 995 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 SMARCC2Q8TAQ2 1214 aa18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 GNEQ9Y223 722 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 MROH7Q68CQ1 1323 aa18.2■□□□□ 0.5
TSPAN4-201ENST00000346501 DCDC2CA8MYV0 355 aa18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 EIF3JO75822 258 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 PLEKHA8P1O95397 391 aa18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 NR3C2P08235 984 aa18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 TXNP10599 105 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 SYN1P17600 705 aa18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 GHRHRQ02643 423 aa18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 FCHSD1Q86WN1 690 aa18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 OR6J1Q8NGC5 347 aa18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 SEZ6LQ9BYH1 1024 aa18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 PXMP2Q9NR77 195 aa18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 BAZ2BQ9UIF8 2168 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 CYP46A1Q9Y6A2 500 aa18.19■□□□□ 0.5
TSPAN4-201ENST00000346501 CEP290O15078 2479 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 A0A0U1RQG5 324 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 RBM47A0AV96 593 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 MYCLP12524 364 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 RPS6KB1P23443 525 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 CCND2P30279 289 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 HOXA13P31271 388 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 METAP2P50579 478 aaKnown RBP eCLIP18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 NKX3-2P78367 333 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 SNX17Q15036 470 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 TRIM60Q495X7 471 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 KCNV1Q6PIU1 500 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 SEPT14Q6ZU15 432 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 Q6ZUG5 572 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 BRF1Q92994 677 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 USP26Q9BXU7 913 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 PRDM5Q9NQX1 630 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 POLR3EQ9NVU0 708 aa18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 COLQQ9Y215 455 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 DDX49Q9Y6V7 483 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-201ENST00000346501 BRCA2P51587 3418 aa18.17■□□□□ 0.5
TSPAN4-201ENST00000346501 TLR3O15455 904 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-201ENST00000346501 ADCY6O43306 1168 aa18.17■□□□□ 0.5
TSPAN4-201ENST00000346501 KPNA6O60684 536 aa18.17■□□□□ 0.5
TSPAN4-201ENST00000346501 BEX3Q00994 111 aa18.17■□□□□ 0.5
TSPAN4-201ENST00000346501 SLC35G1Q2M3R5 365 aa18.17■□□□□ 0.5
TSPAN4-201ENST00000346501 CMTR1Q8N1G2 835 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-201ENST00000346501 EHMT1Q9H9B1 1298 aa18.17■□□□□ 0.5
TSPAN4-201ENST00000346501 COL20A1Q9P218 1284 aa18.17■□□□□ 0.5
TSPAN4-201ENST00000346501 MYADML2A6NDP7 307 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 hCG_1984214I3L0E3 225 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 OPLAHO14841 1288 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 PQBP1O60828 265 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 SLC34A2O95436 690 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 AKAP17AQ02040 695 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 TLE2Q04725 743 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 HABP4Q5JVS0 413 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 CCSAPQ6IQ19 270 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 RUFY3Q7L099 469 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 HEATR3Q7Z4Q2 680 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 ZNF713Q8N859 430 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 PDCD2LQ9BRP1 358 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 PSTPIP2Q9H939 334 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 RBM27Q9P2N5 1060 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 BRPF3Q9ULD4 1205 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 MRVI1Q9Y6F6 885 aa18.16■□□□□ 0.5
TSPAN4-201ENST00000346501 A0A1W2PPC1 479 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 STAM2O75886 525 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 GH1P01241 217 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 CLTBP09497 229 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 CPA1P15085 419 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 APOBRQ0VD83 1088 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 COL9A3Q14050 684 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 GNPTABQ3T906 1256 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 CXCL17Q6UXB2 119 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 FBXL16Q8N461 479 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 TOX2Q96NM4 488 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 TM6SF1Q9BZW5 370 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 GLT8D2Q9H1C3 349 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 LCTP09848 1927 aa18.15■□□□□ 0.5
TSPAN4-201ENST00000346501 ALPK3Q96L96 1907 aa18.14■□□□□ 0.49
TSPAN4-201ENST00000346501 SPDYE3A6NKU9 549 aa18.14■□□□□ 0.49
TSPAN4-201ENST00000346501 ARVCFO00192 962 aa18.14■□□□□ 0.49
TSPAN4-201ENST00000346501 MYL3P08590 195 aa18.14■□□□□ 0.49
TSPAN4-201ENST00000346501 NAPAP54920 295 aa18.14■□□□□ 0.49
TSPAN4-201ENST00000346501 PGM5Q15124 567 aa18.14■□□□□ 0.49
TSPAN4-201ENST00000346501 TEX2Q8IWB9 1127 aa18.14■□□□□ 0.49
TSPAN4-201ENST00000346501 UBE2OQ9C0C9 1292 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-201ENST00000346501 TMEM39AQ9NV64 488 aa18.14■□□□□ 0.49
TSPAN4-201ENST00000346501 V9GY48 417 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-201ENST00000346501 LRRC37A2A6NM11 1700 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms