RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 DNAJC25-GNG10A0A024R161 153 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 hCG_1642624A0A1W2PR95 340 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
SNCA-202ENST00000345009 PPP1R11O60927 126 aaPredicted RBP13.62□□□□□ -0.23
SNCA-202ENST00000345009 COBLO75128 1261 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 DEXIO95424 95 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 CALML3P27482 149 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 RPS6P62753 249 aaKnown RBP13.62□□□□□ -0.23
SNCA-202ENST00000345009 ZNF792Q3KQV3 632 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 TNS4Q8IZW8 715 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 CCDC148Q8NFR7 591 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 DNERQ8NFT8 737 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 MAML3Q96JK9 1138 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 LLPHQ9BRT6 129 aaKnown RBP13.62□□□□□ -0.23
SNCA-202ENST00000345009 BARHL2Q9NY43 387 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 CNPY2Q9Y2B0 182 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 MYH6P13533 1939 aa13.62□□□□□ -0.23
SNCA-202ENST00000345009 ELNP15502 786 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 GNA11P29992 359 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 TMEM92Q6UXU6 159 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 NECAB1Q8N987 351 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 FAM133AQ8N9E0 248 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 BICD2Q8TD16 824 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 NSUN6Q8TEA1 469 aaKnown RBP13.61□□□□□ -0.23
SNCA-202ENST00000345009 TINF2Q9BSI4 451 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 C6orf50Q9HD87 102 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 SH3GLB2Q9NR46 395 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 NRBP1Q9UHY1 535 aa13.61□□□□□ -0.23
SNCA-202ENST00000345009 HSD17B4P51659 736 aa13.6□□□□□ -0.23
SNCA-202ENST00000345009 GHRHRQ02643 423 aa13.6□□□□□ -0.23
SNCA-202ENST00000345009 WWC2Q6AWC2 1192 aa13.6□□□□□ -0.23
SNCA-202ENST00000345009 SMARCC2Q8TAQ2 1214 aa13.6□□□□□ -0.23
SNCA-202ENST00000345009 NPLOC4Q8TAT6 608 aa13.6□□□□□ -0.23
SNCA-202ENST00000345009 GPKOWQ92917 476 aaPredicted RBP eCLIP13.6□□□□□ -0.23
SNCA-202ENST00000345009 ARMC5Q96C12 935 aa13.6□□□□□ -0.23
SNCA-202ENST00000345009 EHMT1Q9H9B1 1298 aa13.6□□□□□ -0.23
SNCA-202ENST00000345009 ORC3Q9UBD5 711 aaPredicted RBP13.6□□□□□ -0.23
SNCA-202ENST00000345009 KIF3AQ9Y496 699 aa13.6□□□□□ -0.23
SNCA-202ENST00000345009 SYNGAP1Q96PV0 1343 aa13.6□□□□□ -0.23
SNCA-202ENST00000345009 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
SNCA-202ENST00000345009 ZNFX1Q9P2E3 1918 aaKnown RBP13.59□□□□□ -0.23
SNCA-202ENST00000345009 SMCO2A6NFE2 343 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 SPDYE3A6NKU9 549 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 STXBP3O00186 592 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 PIK3CDO00329 1044 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 FOSP01100 380 aaPredicted RBP13.59□□□□□ -0.23
SNCA-202ENST00000345009 INHAP05111 366 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 TAL1P17542 331 aaPredicted RBP13.59□□□□□ -0.23
SNCA-202ENST00000345009 ADCY7P51828 1080 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 HMGN5P82970 282 aaKnown RBP13.59□□□□□ -0.23
SNCA-202ENST00000345009 CNTN2Q02246 1040 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 ARHGEF16Q5VV41 709 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 GALNT17Q6IS24 598 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 MAMDC4Q6UXC1 1216 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 TMC2Q8TDI7 906 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 SYTL5Q8TDW5 730 aaPredicted RBP13.59□□□□□ -0.23
SNCA-202ENST00000345009 SH3TC2Q8TF17 1288 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 TRIB2Q92519 343 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 RMDN3Q96TC7 470 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 HMX1Q9NP08 348 aaPredicted RBP13.59□□□□□ -0.23
SNCA-202ENST00000345009 SMCHD1A6NHR9 2005 aa13.59□□□□□ -0.23
SNCA-202ENST00000345009 ESYT2A0FGR8 921 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 PPFIA3O75145 1194 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 CAPN2P17655 700 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 HOXA13P31271 388 aaPredicted RBP13.58□□□□□ -0.24
SNCA-202ENST00000345009 NLRP5P59047 1200 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 PDE4DQ08499 809 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 TRIM29Q14134 588 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 PKN1Q16512 942 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 CCL14Q16627 93 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 SLC30A10Q6XR72 485 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 FCHSD1Q86WN1 690 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 CCDC83Q8IWF9 413 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 FAM184AQ8NB25 1140 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 TMX3Q96JJ7 454 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 ABHD16BQ9H3Z7 469 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 RIC8AQ9NPQ8 531 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
SNCA-202ENST00000345009 HTTP42858 3142 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 RPTORQ8N122 1335 aa13.58□□□□□ -0.24
SNCA-202ENST00000345009 PLXNB2O15031 1838 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 SOWAHBA6NEL2 793 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 MSCO60682 206 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 LARGE1O95461 756 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 CYP2C19P33261 490 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 ALDH5A1P51649 535 aaPredicted RBP13.57□□□□□ -0.24
SNCA-202ENST00000345009 ARMCX2Q7L311 632 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 NSUN7Q8NE18 718 aaKnown RBP13.57□□□□□ -0.24
SNCA-202ENST00000345009 TBC1D5Q92609 795 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 ZNF333Q96JL9 665 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 ZMYND12Q9H0C1 365 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 RNF208Q9H0X6 261 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 FLRT1Q9NZU1 646 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 ZNF236Q9UL36 1845 aa13.57□□□□□ -0.24
SNCA-202ENST00000345009 CENPFP49454 3210 aa13.56□□□□□ -0.24
SNCA-202ENST00000345009 MEIS2O14770 477 aa13.56□□□□□ -0.24
SNCA-202ENST00000345009 OPLAHO14841 1288 aa13.56□□□□□ -0.24
SNCA-202ENST00000345009 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms