RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 GLIS3Q8NEA6 775 aa23.91■■□□□ 1.42
CCDC38-201ENST00000344280 NAPGQ99747 312 aaPredicted RBP23.91■■□□□ 1.42
CCDC38-201ENST00000344280 NOC4LQ9BVI4 516 aaKnown RBP23.91■■□□□ 1.42
CCDC38-201ENST00000344280 FAM196BA6NMK8 535 aa23.91■■□□□ 1.42
CCDC38-201ENST00000344280 CACNB3P54284 484 aa23.91■■□□□ 1.42
CCDC38-201ENST00000344280 TMC4Q7Z404 712 aa23.91■■□□□ 1.42
CCDC38-201ENST00000344280 DNAJC18Q9H819 358 aa23.91■■□□□ 1.42
CCDC38-201ENST00000344280 CLK2P49760 499 aaKnown RBP23.9■■□□□ 1.42
CCDC38-201ENST00000344280 TERF2Q15554 542 aa23.9■■□□□ 1.42
CCDC38-201ENST00000344280 CCDC96Q2M329 555 aa23.9■■□□□ 1.42
CCDC38-201ENST00000344280 CENPPQ6IPU0 288 aa23.9■■□□□ 1.42
CCDC38-201ENST00000344280 SNX29Q8TEQ0 813 aa23.9■■□□□ 1.42
CCDC38-201ENST00000344280 HAS1Q92839 578 aa23.9■■□□□ 1.42
CCDC38-201ENST00000344280 ANKZF1Q9H8Y5 726 aa23.9■■□□□ 1.42
CCDC38-201ENST00000344280 SWAP70Q9UH65 585 aa23.9■■□□□ 1.42
CCDC38-201ENST00000344280 MEA1Q16626 185 aa23.9■■□□□ 1.42
CCDC38-201ENST00000344280 TMEM266Q2M3C6 531 aa23.9■■□□□ 1.42
CCDC38-201ENST00000344280 CDK5RAP3Q96JB5 506 aa23.9■■□□□ 1.42
CCDC38-201ENST00000344280 UNC13DQ70J99 1090 aa23.89■■□□□ 1.42
CCDC38-201ENST00000344280 ZSCAN29Q8IWY8 852 aaPredicted RBP23.89■■□□□ 1.42
CCDC38-201ENST00000344280 RAD54LQ92698 747 aa23.89■■□□□ 1.42
CCDC38-201ENST00000344280 STK17AQ9UEE5 414 aa23.89■■□□□ 1.42
CCDC38-201ENST00000344280 ERCC3P19447 782 aa23.89■■□□□ 1.41
CCDC38-201ENST00000344280 COBLL1Q53SF7 1204 aa23.89■■□□□ 1.41
CCDC38-201ENST00000344280 CEP112Q8N8E3 955 aa23.89■■□□□ 1.41
CCDC38-201ENST00000344280 QTRT2Q9H974 415 aaKnown RBP23.89■■□□□ 1.41
CCDC38-201ENST00000344280 QSER1Q2KHR3 1735 aa23.88■■□□□ 1.41
CCDC38-201ENST00000344280 AMPD2Q01433 879 aa23.88■■□□□ 1.41
CCDC38-201ENST00000344280 PDIA5Q14554 519 aa23.88■■□□□ 1.41
CCDC38-201ENST00000344280 PCMTD1Q96MG8 357 aaPredicted RBP23.88■■□□□ 1.41
CCDC38-201ENST00000344280 DBNDD1Q9H9R9 158 aa23.88■■□□□ 1.41
CCDC38-201ENST00000344280 MYO1AQ9UBC5 1043 aa23.88■■□□□ 1.41
CCDC38-201ENST00000344280 DDX25Q9UHL0 483 aaKnown RBP23.88■■□□□ 1.41
CCDC38-201ENST00000344280 MYH7BA7E2Y1 1941 aa23.88■■□□□ 1.41
CCDC38-201ENST00000344280 RCCD1A6NED2 376 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 ENC1O14682 589 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 ZBTB5O15062 677 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 RAD21O60216 631 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 IDEP14735 1019 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 TSR1Q2NL82 804 aaKnown RBP23.87■■□□□ 1.41
CCDC38-201ENST00000344280 FAM114A1Q8IWE2 563 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 DDX12PQ92771 950 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 TEKT1Q969V4 418 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 PNKPQ96T60 521 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 TCP10Q12799 353 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 LRRC41Q15345 812 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 TMEM119Q4V9L6 283 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 KRT79Q5XKE5 535 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 PPP4R3AQ6IN85 833 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 CUL5Q93034 780 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 HDAC6Q9UBN7 1215 aa23.87■■□□□ 1.41
CCDC38-201ENST00000344280 MYH4Q9Y623 1939 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 USP17L15C9J2P7 530 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 USP17L13C9JLJ4 530 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 USP17L11C9JVI0 530 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 USP17L18D6R9N7 530 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 USP17L22D6RA61 530 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 USP17L17D6RBQ6 530 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 USP17L19D6RCP7 530 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 USP17L20D6RJB6 530 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 EPHB6O15197 1021 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 HSPA1LP34931 641 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 USP17L24Q0WX57 530 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 NCAPH2Q6IBW4 605 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 USP17L6PQ6QN14 398 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 HHIPL2Q6UWX4 724 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 LACRTQ9GZZ8 138 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 NHEJ1Q9H9Q4 299 aaPredicted RBP23.86■■□□□ 1.41
CCDC38-201ENST00000344280 ARFGAP3Q9NP61 516 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 PVALEFA0A1B0GWK0 134 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 NPR1P16066 1061 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 ZBED6P86452 979 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 PPP1R18Q6NYC8 613 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 MTMR8Q96EF0 704 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 ERGIC2Q96RQ1 377 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 PSTPIP2Q9H939 334 aa23.86■■□□□ 1.41
CCDC38-201ENST00000344280 MYO3BQ8WXR4 1341 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 HLA-DOAP06340 250 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 PPP1R2P41236 205 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 CRKP46108 304 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 CCDC122Q5T0U0 273 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 GPATCH4Q5T3I0 446 aaKnown RBP23.85■■□□□ 1.41
CCDC38-201ENST00000344280 COL23A1Q86Y22 540 aaPredicted RBP23.85■■□□□ 1.41
CCDC38-201ENST00000344280 RAB34Q9BZG1 259 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 HAUS4Q9H6D7 363 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 PLEKP08567 350 aaPredicted RBP23.85■■□□□ 1.41
CCDC38-201ENST00000344280 CYP27A1Q02318 531 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 EHHADHQ08426 723 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 KRT27Q7Z3Y8 459 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 KIAA0825Q8IV33 1275 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 RETREG2Q8NC44 543 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 NUP58Q9BVL2 599 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 FUT8Q9BYC5 575 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 MYO6Q9UM54 1294 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 DUSP10Q9Y6W6 482 aa23.85■■□□□ 1.41
CCDC38-201ENST00000344280 GREB1LQ9C091 1923 aaPredicted RBP23.85■■□□□ 1.41
CCDC38-201ENST00000344280 DDTLA6NHG4 134 aaPredicted RBP23.84■■□□□ 1.41
CCDC38-201ENST00000344280 G3V3G9 751 aa23.84■■□□□ 1.41
CCDC38-201ENST00000344280 DCAF8Q5TAQ9 597 aa23.84■■□□□ 1.41
CCDC38-201ENST00000344280 ZNF771Q7L3S4 317 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms