RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 FAM193AP78312 1265 aa22.48■■□□□ 1.19
SPG7-202ENST00000341316 AMPD3Q01432 767 aa22.48■■□□□ 1.19
SPG7-202ENST00000341316 SV2BQ7L1I2 683 aa22.48■■□□□ 1.19
SPG7-202ENST00000341316 HAS1Q92839 578 aa22.48■■□□□ 1.19
SPG7-202ENST00000341316 SLC39A2Q9NP94 309 aa22.48■■□□□ 1.19
SPG7-202ENST00000341316 ECM1Q16610 540 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 CYP26C1Q6V0L0 522 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 RSRC2Q7L4I2 434 aaKnown RBP22.47■■□□□ 1.19
SPG7-202ENST00000341316 CUL5Q93034 780 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 CCDC17Q96LX7 622 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 TUBGCP2Q9BSJ2 902 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 SEMA6BQ9H3T3 888 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 MYH4Q9Y623 1939 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 A0A1W2PQC6 194 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 RAD21O60216 631 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 RBM5P52756 815 aaKnown RBP eCLIP22.47■■□□□ 1.192e-7■■■□□ 18.9
SPG7-202ENST00000341316 PDIA5Q14554 519 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 TMEM266Q2M3C6 531 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 PPP4R3AQ6IN85 833 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 SIAH1Q8IUQ4 282 aa22.47■■□□□ 1.19
SPG7-202ENST00000341316 GPR161Q8N6U8 529 aaKnown RBP22.47■■□□□ 1.19
SPG7-202ENST00000341316 LARP4BQ92615 738 aaKnown RBP22.47■■□□□ 1.19
SPG7-202ENST00000341316 CCDC47Q96A33 483 aaKnown RBP22.47■■□□□ 1.19
SPG7-202ENST00000341316 MAGEC2Q9UBF1 373 aaPredicted RBP22.47■■□□□ 1.19
SPG7-202ENST00000341316 SCN9AQ15858 1988 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 RASSF10A6NK89 507 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 ECE2O60344 883 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 STRIP1Q5VSL9 837 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 CC2D1AQ6P1N0 951 aaPredicted RBP22.46■■□□□ 1.19
SPG7-202ENST00000341316 DYMQ7RTS9 669 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 NOC3LQ8WTT2 800 aaKnown RBP22.46■■□□□ 1.19
SPG7-202ENST00000341316 PSTPIP2Q9H939 334 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 STK17AQ9UEE5 414 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 DDX25Q9UHL0 483 aaKnown RBP22.46■■□□□ 1.19
SPG7-202ENST00000341316 SASH3O75995 380 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 KLK7P49862 253 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 SNX29Q8TEQ0 813 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 CNOT6LQ96LI5 555 aaKnown RBP22.46■■□□□ 1.19
SPG7-202ENST00000341316 UIMC1Q96RL1 719 aa22.46■■□□□ 1.19
SPG7-202ENST00000341316 ATF5Q9Y2D1 282 aaPredicted RBP22.46■■□□□ 1.19
SPG7-202ENST00000341316 BICDL2A1A5D9 508 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 CCDC66A2RUB6 948 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 USP17L15C9J2P7 530 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 USP17L13C9JLJ4 530 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 USP17L11C9JVI0 530 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 USP17L18D6R9N7 530 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 USP17L22D6RA61 530 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 USP17L17D6RBQ6 530 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 USP17L19D6RCP7 530 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 USP17L20D6RJB6 530 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 TBC1D8O95759 1140 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 ARHGAP25P42331 645 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 MRPL12P52815 198 aaKnown RBP22.45■■□□□ 1.18
SPG7-202ENST00000341316 USP17L24Q0WX57 530 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 QRICH1Q2TAL8 776 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 CERKLQ49MI3 558 aaPredicted RBP22.45■■□□□ 1.18
SPG7-202ENST00000341316 CNNM4Q6P4Q7 775 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 USP17L6PQ6QN14 398 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 RAD54LQ92698 747 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 SLF1Q9BQI6 1058 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 HMGB2P26583 209 aaKnown RBP22.45■■□□□ 1.18
SPG7-202ENST00000341316 TMEM119Q4V9L6 283 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 COBLL1Q53SF7 1204 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 MKL1Q969V6 931 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 CDK5RAP3Q96JB5 506 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 MRIQ9BWK5 157 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 IDI2Q9BXS1 227 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 CAPN11Q9UMQ6 739 aa22.45■■□□□ 1.18
SPG7-202ENST00000341316 REXO2Q9Y3B8 237 aaKnown RBP22.45■■□□□ 1.18
SPG7-202ENST00000341316 ATP8B1O43520 1251 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 KIF5CO60282 957 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 CHRNA5P30532 468 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 DNM2P50570 870 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 SEPT2Q15019 361 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 MIIPQ5JXC2 388 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 ZNF569Q5MCW4 686 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 WDR59Q6PJI9 974 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 UNC13DQ70J99 1090 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 ZSCAN29Q8IWY8 852 aaPredicted RBP22.44■■□□□ 1.18
SPG7-202ENST00000341316 OR8K1Q8NGG5 319 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 DNAJC7Q99615 494 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 DHX36Q9H2U1 1008 aaKnown RBP22.44■■□□□ 1.18
SPG7-202ENST00000341316 PI4KBQ9UBF8 816 aa22.44■■□□□ 1.18
SPG7-202ENST00000341316 POLR3GO15318 223 aaPredicted RBP22.43■■□□□ 1.18
SPG7-202ENST00000341316 CYP2C19P33261 490 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 SLC1A4P43007 532 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 KRT79Q5XKE5 535 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 SLFN13Q68D06 897 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 CENPPQ6IPU0 288 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 FLAD1Q8NFF5 587 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 TTYH3Q9C0H2 523 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 LUC7L2Q9Y383 392 aaKnown RBP22.43■■□□□ 1.18
SPG7-202ENST00000341316 GLIS3Q8NEA6 775 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 RABGGTAQ92696 567 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 GOLGA1Q92805 767 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 PARD6BQ9BYG5 372 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 RAB34Q9BZG1 259 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 AGPAT5Q9NUQ2 364 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 NYAP2Q9P242 653 aa22.43■■□□□ 1.18
SPG7-202ENST00000341316 SLX4Q8IY92 1834 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms