RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 MYL10Q9BUA6 226 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
RTN3-203ENST00000341307 B4DLN1 442 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 OPA1O60313 960 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 PPP1R37O75864 691 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 OATP04181 439 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 GNPTABQ3T906 1256 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 KDM7AQ6ZMT4 941 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 FBXL16Q8N461 479 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 CNBD1Q8NA66 436 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 NLGN2Q8NFZ4 835 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 RBM41Q96IZ5 413 aaKnown RBP13.13□□□□□ -0.31
RTN3-203ENST00000341307 GORASP1Q9BQQ3 440 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 FAM184BQ9ULE4 1060 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 RGL2O15211 777 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 FAM107AO95990 144 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 ATP4AP20648 1035 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 ABL2P42684 1182 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 SPECC1Q5M775 1068 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 TRAPPC11Q7Z392 1133 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 CCDC97Q96F63 343 aaPredicted RBP13.13□□□□□ -0.31
RTN3-203ENST00000341307 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
RTN3-203ENST00000341307 PANX2Q96RD6 677 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 TSC22D3Q99576 134 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 ZSWIM5Q9P217 1185 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 BAIAP2L1Q9UHR4 511 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 L3MBTL1Q9Y468 752 aa13.13□□□□□ -0.31
RTN3-203ENST00000341307 UPP2O95045 317 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 SERPINB2P05120 415 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 ALDH1B1P30837 517 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 APBA1Q02410 837 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 KCTD16Q68DU8 428 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 NAA16Q6N069 864 aaPredicted RBP13.12□□□□□ -0.31
RTN3-203ENST00000341307 CRELD2Q6UXH1 353 aaPredicted RBP13.12□□□□□ -0.31
RTN3-203ENST00000341307 SND1Q7KZF4 910 aaKnown RBP eCLIP13.12□□□□□ -0.311e-9■■■■□ 22.5
RTN3-203ENST00000341307 GALNT15Q8N3T1 639 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 MKL1Q969V6 931 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 SLC5A4Q9NY91 659 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 TUBE1Q9UJT0 475 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 ANGEL1Q9UNK9 670 aaKnown RBP13.12□□□□□ -0.31
RTN3-203ENST00000341307 CYP2D7A0A087X1C5 515 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 MAGEB6P1A0A0J9YX57 407 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 SH2B2O14492 632 aaPredicted RBP13.12□□□□□ -0.31
RTN3-203ENST00000341307 MYBL1P10243 752 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 SCNN1BP51168 640 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 FBXO33Q7Z6M2 555 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 MICU3Q86XE3 530 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 TSEN2Q8NCE0 465 aaKnown RBP13.12□□□□□ -0.31
RTN3-203ENST00000341307 ACRBPQ8NEB7 543 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 ZFAND2BQ8WV99 257 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 CYFIP2Q96F07 1278 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
RTN3-203ENST00000341307 YIPF2Q9BWQ6 316 aa13.12□□□□□ -0.31
RTN3-203ENST00000341307 MAP3K13O43283 966 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 POLD1P28340 1107 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 PRDX5P30044 214 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 HIBADHP31937 336 aaKnown RBP13.11□□□□□ -0.31
RTN3-203ENST00000341307 EVX2Q03828 476 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 ALX1Q15699 326 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 LACTB2Q53H82 288 aaPredicted RBP13.11□□□□□ -0.31
RTN3-203ENST00000341307 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
RTN3-203ENST00000341307 ANKIB1Q9P2G1 1089 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 AKR1B15C9JRZ8 316 aaPredicted RBP13.11□□□□□ -0.31
RTN3-203ENST00000341307 UBE2Q2LH0YL09 131 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 DNAJC8O75937 253 aaPredicted RBP13.11□□□□□ -0.31
RTN3-203ENST00000341307 MAGEA10P43363 369 aaPredicted RBP13.11□□□□□ -0.31
RTN3-203ENST00000341307 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
RTN3-203ENST00000341307 SLMAPQ14BN4 828 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 SETDB1Q15047 1291 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 CCDC178Q5BJE1 867 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 AKNAD1Q5T1N1 836 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 EMC10Q5UCC4 262 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 IGDCC4Q8TDY8 1250 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 RIOK1Q9BRS2 568 aaKnown RBP13.11□□□□□ -0.31
RTN3-203ENST00000341307 MMADHCQ9H3L0 296 aaPredicted RBP13.11□□□□□ -0.31
RTN3-203ENST00000341307 RMI1Q9H9A7 625 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 PIDD1Q9HB75 910 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 HDAC6Q9UBN7 1215 aa13.11□□□□□ -0.31
RTN3-203ENST00000341307 CPLX1O14810 134 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 CDC27P30260 824 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
RTN3-203ENST00000341307 NNTQ13423 1086 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 TMEM67Q5HYA8 995 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 PPP1R15BQ5SWA1 713 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 HINFPQ9BQA5 517 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 ZFATQ9P243 1243 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 CHRNA5P30532 468 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 MECOMQ03112 1051 aa13.1□□□□□ -0.31
RTN3-203ENST00000341307 BYSLQ13895 437 aaKnown RBP13.1□□□□□ -0.31
RTN3-203ENST00000341307 APOA5Q6Q788 366 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms