RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ANKRD33Q7Z3H0 272 aa15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 SYTL5Q8TDW5 730 aaPredicted RBP15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 SCFD2Q8WU76 684 aa15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 PURBQ96QR8 312 aaKnown RBP15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 SPZ1Q9BXG8 430 aa15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 SENP2Q9HC62 589 aa15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 PCDHA1Q9Y5I3 950 aa15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 TRIOBPQ9H2D6 2365 aa15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 PNMA6FA0A0J9YX94 578 aa15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 A0A0U1RQG5 324 aaPredicted RBP15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 MYADML2A6NDP7 307 aa15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 CTAGE5O15320 804 aa15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 HMGB1P09429 215 aaKnown RBP15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 HSD17B4P51659 736 aa15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 BRDTQ58F21 947 aaPredicted RBP15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 EEPD1Q7L9B9 569 aa15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 SGMS1Q86VZ5 419 aa15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 WDR11Q9BZH6 1224 aa15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 UBE2OQ9C0C9 1292 aaKnown RBP15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 PDGFCQ9NRA1 345 aa15.46■□□□□ 0.07
SIRPB3P-201ENST00000340424 DCDC2CA8MYV0 355 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 CLTBP09497 229 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 CPT1AP50416 773 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 TLE2Q04725 743 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 PPP2R5BQ15173 497 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 STXBP2Q15833 593 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 HOMER1Q86YM7 354 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 TDHQ8IZJ6 230 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 NEK1Q96PY6 1258 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 RMDN3Q96TC7 470 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 PDLIM7Q9NR12 457 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 SLC12A7Q9Y666 1083 aa15.45■□□□□ 0.06
SIRPB3P-201ENST00000340424 DYNC1LI2O43237 492 aaPredicted RBP15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 EPB41L2O43491 1005 aaKnown RBP15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 CYTH3O43739 400 aa15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 PQBP1O60828 265 aaKnown RBP15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 PPP1R11O60927 126 aaPredicted RBP15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 REC8O95072 547 aa15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 CFBP00751 764 aa15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 TTLL4Q14679 1199 aa15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 ARHGEF16Q5VV41 709 aa15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 SYNE3Q6ZMZ3 975 aa15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 RRP36Q96EU6 259 aaKnown RBP15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 PIGSQ96S52 555 aa15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 PRDM5Q9NQX1 630 aaPredicted RBP15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 PPP4R2Q9NY27 417 aa15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 SEC63Q9UGP8 760 aaKnown RBP15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 LTBP2Q14767 1821 aa15.44■□□□□ 0.06
SIRPB3P-201ENST00000340424 GCOM1H8Y6P7 765 aaPredicted RBP15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 ARVCFO00192 962 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 OPLAHO14841 1288 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 KIAA0355O15063 1070 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 KPNA6O60684 536 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 POLR2MP0CAP2 368 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 DHX32Q7L7V1 743 aaKnown RBP15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 TBC1D5Q92609 795 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 VTI1AQ96AJ9 217 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 TAAR1Q96RJ0 339 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 PXMP2Q9NR77 195 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 POLR3EQ9NVU0 708 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 COL20A1Q9P218 1284 aa15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 DDX49Q9Y6V7 483 aaKnown RBP15.43■□□□□ 0.06
SIRPB3P-201ENST00000340424 TLR3O15455 904 aaKnown RBP15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 EIF3JO75822 258 aaKnown RBP15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 CDK7P50613 346 aa15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 RCAN1P53805 252 aa15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 MDM2Q00987 491 aaPredicted RBP15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 BEX3Q00994 111 aa15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 SLC35G1Q2M3R5 365 aa15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 LRIT3Q3SXY7 679 aa15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 KCNB2Q92953 911 aa15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 MYL10Q9BUA6 226 aa15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 GPHNQ9NQX3 736 aaPredicted RBP15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 SZT2Q5T011 3432 aa15.42■□□□□ 0.06
SIRPB3P-201ENST00000340424 TRIM43BA6NCK2 446 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 NR3C2P08235 984 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 TXNP10599 105 aaKnown RBP15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 EXOSC10Q01780 885 aaKnown RBP15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 FAAP100Q0VG06 881 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 GPR153Q6NV75 609 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 KCNV1Q6PIU1 500 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 CXCL17Q6UXB2 119 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 TEX2Q8IWB9 1127 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 FANCBQ8NB91 859 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 SLC43A3Q8NBI5 491 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 OR6J1Q8NGC5 347 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 TRIM43Q96BQ3 446 aaPredicted RBP15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 TMEM39AQ9NV64 488 aa15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 RBM28Q9NW13 759 aaKnown RBP15.41■□□□□ 0.06
SIRPB3P-201ENST00000340424 A6NJR5 290 aa15.4■□□□□ 0.06
SIRPB3P-201ENST00000340424 RAG1P15918 1043 aa15.4■□□□□ 0.06
SIRPB3P-201ENST00000340424 EIF2AK2P19525 551 aaKnown RBP15.4■□□□□ 0.06
SIRPB3P-201ENST00000340424 HSPA4P34932 840 aa15.4■□□□□ 0.06
SIRPB3P-201ENST00000340424 IRX5P78411 483 aaPredicted RBP15.4■□□□□ 0.06
SIRPB3P-201ENST00000340424 ITGA7Q13683 1181 aa15.4■□□□□ 0.06
SIRPB3P-201ENST00000340424 CCDC62Q6P9F0 684 aa15.4■□□□□ 0.06
SIRPB3P-201ENST00000340424 APOA5Q6Q788 366 aa15.4■□□□□ 0.06
SIRPB3P-201ENST00000340424 PDCD2LQ9BRP1 358 aa15.4■□□□□ 0.06
SIRPB3P-201ENST00000340424 KIAA1217Q5T5P2 1943 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms