RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 WNK4Q96J92 1243 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 GOLPH3LQ9H4A5 285 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 ACAD9Q9H845 621 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 TUFT1Q9NNX1 390 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 KCND2Q9NZV8 630 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 PASKQ96RG2 1323 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 YY1P25490 414 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 ICAM3P32942 547 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 SARSP49591 514 aaKnown RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 MDM2Q00987 491 aaPredicted RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 AMPD3Q01432 767 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 IKQ13123 557 aaPredicted RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 PPP2R5CQ13362 524 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 TMEM119Q4V9L6 283 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 EARS2Q5JPH6 523 aaKnown RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 HAUS3Q68CZ6 603 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 CCDC82Q8N4S0 544 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 GSDMAQ96QA5 445 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 TIPINQ9BVW5 301 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 DACT1Q9NYF0 836 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 ZNF214Q9UL59 606 aaPredicted RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 UBIAD1Q9Y5Z9 338 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 SPDYE16A6NNV3 312 aaPredicted RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 UBE2Q2LH0YL09 131 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 ACTN4O43707 911 aaKnown RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 GTPBP6O43824 516 aaPredicted RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 LIG1P18858 919 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 SLC16A2P36021 539 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 FOXD4L5Q5VV16 416 aaPredicted RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 ETNPPLQ8TBG4 499 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 FOXD4L4Q8WXT5 416 aaPredicted RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 GBA2Q9HCG7 927 aaPredicted RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 GJB4Q9NTQ9 266 aa8.11□□□□□ -1.11
NUP43-201ENST00000340413 DDX25Q9UHL0 483 aaKnown RBP8.11□□□□□ -1.11
NUP43-201ENST00000340413 DKC1O60832 514 aaKnown RBP eCLIP8.1□□□□□ -1.11
NUP43-201ENST00000340413 FLOT1O75955 427 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 LYPLA2O95372 231 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 XRCC6P12956 609 aaKnown RBP eCLIP8.1□□□□□ -1.11
NUP43-201ENST00000340413 INF2Q27J81 1249 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 FAM173BQ6P4H8 233 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 B3GNT9Q6UX72 402 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 GIMAP8Q8ND71 665 aaPredicted RBP8.1□□□□□ -1.11
NUP43-201ENST00000340413 CSRNP2Q9H175 543 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 KIAA1468Q9P260 1216 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 DIS3Q9Y2L1 958 aaKnown RBP8.1□□□□□ -1.11
NUP43-201ENST00000340413 PLXNB2O15031 1838 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 MANSC4A6NHS7 340 aaPredicted RBP8.1□□□□□ -1.11
NUP43-201ENST00000340413 MEIS1O00470 390 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 IKBKBO14920 756 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 NDUFA8P51970 172 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 NLRP12P59046 1061 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 FSTL1Q12841 308 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 SHROOM1Q2M3G4 852 aaPredicted RBP8.1□□□□□ -1.11
NUP43-201ENST00000340413 KIFC2Q96AC6 838 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 VAT1LQ9HCJ6 419 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 TBC1D22BQ9NU19 505 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 IGLV3-22A0A075B6J6 115 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 EDIL3O43854 480 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 NR1I2O75469 434 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 GPAT2Q6NUI2 795 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 SASS6Q6UVJ0 657 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 CEP57L1Q8IYX8 460 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 ZKSCAN4Q969J2 545 aaPredicted RBP8.1□□□□□ -1.11
NUP43-201ENST00000340413 CALML4Q96GE6 196 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 C7orf25Q9BPX7 421 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 DISC1Q9NRI5 854 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 BIN2Q9UBW5 565 aaPredicted RBP8.1□□□□□ -1.11
NUP43-201ENST00000340413 SRCAPQ6ZRS2 3230 aa8.1□□□□□ -1.11
NUP43-201ENST00000340413 CCNT1O60563 726 aaKnown RBP8.09□□□□□ -1.11
NUP43-201ENST00000340413 ABCD1P33897 745 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 CCNA1P78396 465 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 PSMD2Q13200 908 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 NBR1Q14596 966 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 TPRNQ4KMQ1 711 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 NLRX1Q86UT6 975 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 MLKLQ8NB16 471 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 CCDC47Q96A33 483 aaKnown RBP8.09□□□□□ -1.11
NUP43-201ENST00000340413 NUP88Q99567 741 aaPredicted RBP8.09□□□□□ -1.11
NUP43-201ENST00000340413 MXRA8Q9BRK3 442 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 CFHR5Q9BXR6 569 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 GLIS2Q9BZE0 524 aaPredicted RBP8.09□□□□□ -1.11
NUP43-201ENST00000340413 JADE2Q9NQC1 790 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 PVALEFA0A1B0GWK0 134 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 EDNRBP24530 442 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 CCND2P30279 289 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 SFNP31947 248 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 ZNF174Q15697 407 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 PDXDC2PQ6P474 469 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 FAM200AQ8TCP9 573 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 SYTL5Q8TDW5 730 aaPredicted RBP8.09□□□□□ -1.11
NUP43-201ENST00000340413 LENG9Q96B70 501 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 GDPD2Q9HCC8 539 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 KBTBD4Q9NVX7 518 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 ADD3Q9UEY8 706 aaKnown RBP8.09□□□□□ -1.11
NUP43-201ENST00000340413 KIAA1217Q5T5P2 1943 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 ADGRA2Q96PE1 1338 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 ERCC5P28715 1186 aaPredicted RBP8.09□□□□□ -1.11
NUP43-201ENST00000340413 FOSBP53539 338 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 SLC10A4Q96EP9 437 aa8.09□□□□□ -1.11
NUP43-201ENST00000340413 TRERF1Q96PN7 1200 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms