RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 KLHDC7AQ5VTJ3 777 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 CCDC121Q6ZUS5 278 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 SRBD1Q8N5C6 995 aaKnown RBP22.55■■□□□ 1.2
RUNX3-202ENST00000338888 C4orf32Q8N8J7 132 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 CYFIP2Q96F07 1278 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 RBM28Q9NW13 759 aaKnown RBP22.55■■□□□ 1.2
RUNX3-202ENST00000338888 FIGNQ5HY92 759 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 ARL6IP4Q66PJ3 421 aaKnown RBP22.55■■□□□ 1.2
RUNX3-202ENST00000338888 TMTC3Q6ZXV5 915 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 IQCA1Q86XH1 822 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 CD302Q8IX05 232 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 CASKIN2Q8WXE0 1202 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 PNPLA7Q6ZV29 1317 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 KAT6BQ8WYB5 2073 aa22.55■■□□□ 1.2
RUNX3-202ENST00000338888 CCNE1P24864 410 aa22.54■■□□□ 1.2
RUNX3-202ENST00000338888 RNASE9P60153 205 aaKnown RBP22.54■■□□□ 1.2
RUNX3-202ENST00000338888 VEZTQ9HBM0 779 aa22.54■■□□□ 1.2
RUNX3-202ENST00000338888 PLAAQ9Y263 795 aa22.54■■□□□ 1.2
RUNX3-202ENST00000338888 SPRED3Q2MJR0 410 aa22.54■■□□□ 1.2
RUNX3-202ENST00000338888 KIF6Q6ZMV9 814 aa22.54■■□□□ 1.2
RUNX3-202ENST00000338888 KRT12Q99456 494 aa22.54■■□□□ 1.2
RUNX3-202ENST00000338888 MMRN2Q9H8L6 949 aa22.54■■□□□ 1.2
RUNX3-202ENST00000338888 CNTNAP5Q8WYK1 1306 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 CYP2D7A0A087X1C5 515 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 HMGB1P1B2RPK0 211 aaPredicted RBP22.53■■□□□ 1.2
RUNX3-202ENST00000338888 HNRNPH3P31942 346 aaKnown RBP22.53■■□□□ 1.2
RUNX3-202ENST00000338888 WLSQ5T9L3 541 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 FAM114A1Q8IWE2 563 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 MIEF2Q96C03 454 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 ASAP1Q9ULH1 1129 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 UBA7P41226 1012 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 GFPT1Q06210 699 aaPredicted RBP22.53■■□□□ 1.2
RUNX3-202ENST00000338888 STK4Q13043 487 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 SNCBQ16143 134 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 CCDC178Q5BJE1 867 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 RRAGAQ7L523 313 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 TMC4Q7Z404 712 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 ZSCAN29Q8IWY8 852 aaPredicted RBP22.53■■□□□ 1.2
RUNX3-202ENST00000338888 MREGQ8N565 214 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 LRRC15Q8TF66 581 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 GGA2Q9UJY4 613 aa22.53■■□□□ 1.2
RUNX3-202ENST00000338888 MYH2Q9UKX2 1941 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 GOLGA6L7A0A1B0GV03 622 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 IRS4O14654 1257 aaPredicted RBP22.52■■□□□ 1.2
RUNX3-202ENST00000338888 FGFR2P21802 821 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 PDE4DQ08499 809 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 HLFQ16534 295 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 DTHD1Q6ZMT9 781 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 PARP9Q8IXQ6 854 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 NOX5Q96PH1 765 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 DDX20Q9UHI6 824 aaKnown RBP22.52■■□□□ 1.2
RUNX3-202ENST00000338888 A0A0G2JS52 829 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 BICDL2A1A5D9 508 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 LRRC53A6NM62 1247 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 DNM1LO00429 736 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 LCA5LO95447 670 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 SCG2P13521 617 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 CYB5D1Q6P9G0 228 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 RASGRP4Q8TDF6 673 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 PIGBQ92521 554 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 OSBPL7Q9BZF2 842 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 KBTBD4Q9NVX7 518 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 LRP2BPQ9P2M1 347 aa22.52■■□□□ 1.2
RUNX3-202ENST00000338888 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.52■■□□□ 1.2
RUNX3-202ENST00000338888 FCER1AP12319 257 aa22.51■■□□□ 1.19
RUNX3-202ENST00000338888 PPP4R3AQ6IN85 833 aa22.51■■□□□ 1.19
RUNX3-202ENST00000338888 FAM228AQ86W67 206 aa22.51■■□□□ 1.19
RUNX3-202ENST00000338888 FUKQ8N0W3 1084 aa22.51■■□□□ 1.19
RUNX3-202ENST00000338888 SCLT1Q96NL6 688 aa22.51■■□□□ 1.19
RUNX3-202ENST00000338888 HAUS2Q9NVX0 235 aa22.51■■□□□ 1.19
RUNX3-202ENST00000338888 LTBP4Q8N2S1 1624 aa22.51■■□□□ 1.19
RUNX3-202ENST00000338888 SLC1A4P43007 532 aa22.51■■□□□ 1.19
RUNX3-202ENST00000338888 DRP2Q13474 957 aa22.51■■□□□ 1.19
RUNX3-202ENST00000338888 TMEM60Q9H2L4 133 aa22.51■■□□□ 1.19
RUNX3-202ENST00000338888 GMNCA6NCL1 334 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 BACH1O14867 736 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 ATP2C2O75185 946 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 ECM2O94769 699 aaPredicted RBP22.5■■□□□ 1.19
RUNX3-202ENST00000338888 SLC5A1P13866 664 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 ADGRA1Q86SQ6 560 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 NLRP10Q86W26 655 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 OR2W6PQ8NHA6 318 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 HPS3Q969F9 1004 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 TMBIM4Q9HC24 238 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 SHANK3Q9BYB0 1731 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 GOLGA6L10A6NI86 522 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 ERCC3P19447 782 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 CYP7A1P22680 504 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 E2F5Q15329 346 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 QPCTQ16769 361 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 ACTR5Q9H9F9 607 aaPredicted RBP22.5■■□□□ 1.19
RUNX3-202ENST00000338888 SIK3Q9Y2K2 1263 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 FAM205AQ6ZU69 1335 aa22.5■■□□□ 1.19
RUNX3-202ENST00000338888 FTCDO95954 541 aa22.49■■□□□ 1.19
RUNX3-202ENST00000338888 BCAMP50895 628 aa22.49■■□□□ 1.19
RUNX3-202ENST00000338888 CCDC155Q8N6L0 562 aa22.49■■□□□ 1.19
RUNX3-202ENST00000338888 WHAMMQ8TF30 809 aa22.49■■□□□ 1.19
RUNX3-202ENST00000338888 PJA2O43164 708 aa22.49■■□□□ 1.19
RUNX3-202ENST00000338888 CALM1P0DP23 149 aa22.49■■□□□ 1.19
RUNX3-202ENST00000338888 CALM2P0DP24 149 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms