RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 RRAGDQ9NQL2 400 aaPredicted RBP18.29■□□□□ 0.52
HPS1-202ENST00000338546 MAP3K20Q9NYL2 800 aaKnown RBP18.29■□□□□ 0.52
HPS1-202ENST00000338546 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.29■□□□□ 0.52
HPS1-202ENST00000338546 IMPACTQ9P2X3 320 aa18.29■□□□□ 0.52
HPS1-202ENST00000338546 LMOD1P29536 600 aaPredicted RBP18.28■□□□□ 0.52
HPS1-202ENST00000338546 GHRHRQ02643 423 aa18.28■□□□□ 0.52
HPS1-202ENST00000338546 ZYXQ15942 572 aaKnown RBP18.28■□□□□ 0.52
HPS1-202ENST00000338546 NOL9Q5SY16 702 aaKnown RBP18.28■□□□□ 0.52
HPS1-202ENST00000338546 HYIQ5T013 277 aa18.28■□□□□ 0.52
HPS1-202ENST00000338546 CNNM4Q6P4Q7 775 aa18.28■□□□□ 0.52
HPS1-202ENST00000338546 KCTD17Q8N5Z5 321 aa18.28■□□□□ 0.52
HPS1-202ENST00000338546 SYT17Q9BSW7 474 aa18.28■□□□□ 0.52
HPS1-202ENST00000338546 PICK1Q9NRD5 415 aa18.28■□□□□ 0.52
HPS1-202ENST00000338546 ADARB2Q9NS39 739 aaKnown RBP18.28■□□□□ 0.52
HPS1-202ENST00000338546 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.28■□□□□ 0.52
HPS1-202ENST00000338546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.28■□□□□ 0.52
HPS1-202ENST00000338546 KDM3AQ9Y4C1 1321 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 PPP1R3GB7ZBB8 358 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 C19orf81C9J6K1 198 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 ZNF18P17022 549 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 PPP1R2P41236 205 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 BACE1P56817 501 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 FANCCQ00597 558 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 SPATA1Q5VX52 437 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 LDHDQ86WU2 507 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 SPC24Q8NBT2 197 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 CDK5RAP3Q96JB5 506 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 C12orf42Q96LP6 360 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 NT5C3AQ9H0P0 336 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
HPS1-202ENST00000338546 RHOBTB3O94955 611 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 INPP5BP32019 993 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 EPS15P42566 896 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 HIRAP54198 1017 aaPredicted RBP18.26■□□□□ 0.51
HPS1-202ENST00000338546 GRB10Q13322 594 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 TMEM119Q4V9L6 283 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 CCDC174Q6PII3 467 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 SV2BQ7L1I2 683 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 MCF2L2Q86YR7 1114 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 ZNF280CQ8ND82 737 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 P2RX7Q99572 595 aaKnown RBP18.26■□□□□ 0.51
HPS1-202ENST00000338546 BLZF1Q9H2G9 400 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 FANCLQ9NW38 375 aa18.26■□□□□ 0.51
HPS1-202ENST00000338546 SCAF8Q9UPN6 1271 aaKnown RBP18.26■□□□□ 0.51
HPS1-202ENST00000338546 GOLGB1Q14789 3259 aaKnown RBP18.26■□□□□ 0.51
HPS1-202ENST00000338546 PTPRAP18433 802 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 FMR1Q06787 632 aaKnown RBP eCLIP18.25■□□□□ 0.512e-6■■■■□ 22.7
HPS1-202ENST00000338546 ETNPPLQ8TBG4 499 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 SNX29Q8TEQ0 813 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 STAMQ92783 540 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 KLRG1Q96E93 195 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 PNMA5Q96PV4 448 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 WRNIP1Q96S55 665 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 TRIM9Q9C026 710 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 SLC38A10Q9HBR0 1119 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 FBXO28Q9NVF7 368 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 RWDD2AQ9UIY3 292 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 PPP1R9AQ9ULJ8 1098 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 NFE2L3Q9Y4A8 694 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 KLRC4O43908 158 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 CASP1P29466 404 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 GSDMDP57764 484 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 COBLL1Q53SF7 1204 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 CCDC186Q7Z3E2 898 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 CCDC84Q86UT8 332 aaPredicted RBP18.25■□□□□ 0.51
HPS1-202ENST00000338546 LENG9Q96B70 501 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 XPO4Q9C0E2 1151 aaKnown RBP18.25■□□□□ 0.51
HPS1-202ENST00000338546 MAF1Q9H063 256 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 EMILIN3Q9NT22 766 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 IFNKQ9P0W0 207 aa18.25■□□□□ 0.51
HPS1-202ENST00000338546 ZNF536O15090 1300 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 PVALEFA0A1B0GWK0 134 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 CFBP00751 764 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 SERPINC1P01008 464 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 VCAM1P19320 739 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 HSD17B4P51659 736 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 STIM1Q13586 685 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 MTMR2Q13614 643 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 HAUS3Q68CZ6 603 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 GIMAP8Q8ND71 665 aaPredicted RBP18.24■□□□□ 0.51
HPS1-202ENST00000338546 ERMNQ8TAM6 284 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 LARP4BQ92615 738 aaKnown RBP18.24■□□□□ 0.51
HPS1-202ENST00000338546 RAD54LQ92698 747 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 BLOC1S4Q9NUP1 217 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 RNF181Q9P0P0 153 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 CCPG1Q9ULG6 757 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 SYNRGQ9UMZ2 1314 aa18.24■□□□□ 0.51
HPS1-202ENST00000338546 POTEMA6NI47 508 aa18.23■□□□□ 0.51
HPS1-202ENST00000338546 ZBED4O75132 1171 aa18.23■□□□□ 0.51
HPS1-202ENST00000338546 CD44P16070 742 aaKnown RBP18.23■□□□□ 0.51
HPS1-202ENST00000338546 HOXA13P31271 388 aaPredicted RBP18.23■□□□□ 0.51
HPS1-202ENST00000338546 ZNF76P36508 570 aa18.23■□□□□ 0.51
HPS1-202ENST00000338546 UBASH3AP57075 661 aa18.23■□□□□ 0.51
HPS1-202ENST00000338546 SPP2Q13103 211 aa18.23■□□□□ 0.51
HPS1-202ENST00000338546 KMT5BQ4FZB7 885 aa18.23■□□□□ 0.51
HPS1-202ENST00000338546 PRR16Q569H4 304 aa18.23■□□□□ 0.51
HPS1-202ENST00000338546 MED15Q96RN5 788 aa18.23■□□□□ 0.51
HPS1-202ENST00000338546 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
HPS1-202ENST00000338546 ATP1A3P13637 1013 aa18.22■□□□□ 0.51
HPS1-202ENST00000338546 CDK11BP21127 795 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms