RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ARHGEF10O15013 1369 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 CIB2O75838 187 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 PDE6AP16499 860 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 RASSF2P50749 326 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 GFPT1Q06210 699 aaPredicted RBP14.5□□□□□ -0.09
COL2A1-201ENST00000337299 VWA3BQ502W6 1294 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 C6orf50Q9HD87 102 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 AGPAT5Q9NUQ2 364 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 SCOCQ9UIL1 159 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 ARHGAP44Q17R89 818 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 MYCBPAPQ8TBZ2 947 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 SNX12Q9UMY4 172 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 TCHHQ07283 1943 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 SH2B2O14492 632 aaPredicted RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 ERVK-24P63145 666 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 PTGISQ16647 500 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 CFAP157Q5JU67 520 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 SLC30A9Q6PML9 568 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 LONP2Q86WA8 852 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 P2RX5Q93086 422 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 KIFC2Q96AC6 838 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 SEC16BQ96JE7 1060 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 SETDB2Q96T68 719 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 FMO2Q99518 471 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 DAAM1Q9Y4D1 1078 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 LGALS16A8MUM7 142 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 PGRMC1O00264 195 aaKnown RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 FMNL1O95466 1100 aaPredicted RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 ITGA6P23229 1130 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 KCNQ4P56696 695 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 COG7P83436 770 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 CCDC62Q6P9F0 684 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 FAM133AQ8N9E0 248 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 CFAP61Q8NHU2 1237 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 PSMD1Q99460 953 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 CRNKL1Q9BZJ0 848 aaKnown RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 NOD2Q9HC29 1040 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 RBM12Q9NTZ6 932 aaKnown RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 TET3O43151 1660 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 SH3TC1Q8TE82 1336 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 RNF17Q9BXT8 1623 aaKnown RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 KIF1BO60333 1816 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 H2AFZP0C0S5 128 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 MSH2P43246 934 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 FAM182BQ5T319 152 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 H2AFVQ71UI9 128 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 APBB1IPQ7Z5R6 666 aaPredicted RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 ZC3H18Q86VM9 953 aaKnown RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 RNF168Q8IYW5 571 aaPredicted RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 DDX27Q96GQ7 796 aaKnown RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 FBXL5Q9UKA1 691 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 ASAP1Q9ULH1 1129 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 SALL3Q9BXA9 1300 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 ZNF335Q9H4Z2 1342 aaPredicted RBP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 GNAT2P19087 354 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 CRYMQ14894 314 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 CCDC152Q4G0S7 254 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 DDX42Q86XP3 938 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL2A1-201ENST00000337299 RAB21Q9UL25 225 aa14.49□□□□□ -0.09
COL2A1-201ENST00000337299 DBN1Q16643 649 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 WDR93Q6P2C0 686 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 MARCH10Q8NA82 808 aaPredicted RBP14.48□□□□□ -0.09
COL2A1-201ENST00000337299 CHMP6Q96FZ7 201 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 ARPP21Q9UBL0 812 aaPredicted RBP14.48□□□□□ -0.09
COL2A1-201ENST00000337299 CTDP1Q9Y5B0 961 aaPredicted RBP14.48□□□□□ -0.09
COL2A1-201ENST00000337299 IFNAR1P17181 557 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 PPP1R2P41236 205 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 SPATA24Q86W54 205 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 SNX24Q9Y343 169 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 FAM107AO95990 144 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 NLRP3Q96P20 1036 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 ETNK1Q9HBU6 452 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 PCDHB13Q9Y5F0 798 aa14.48□□□□□ -0.09
COL2A1-201ENST00000337299 FAM205CA6NFA0 338 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 GNAQP50148 359 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 MAP7Q14244 749 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 CYB5R4Q7L1T6 521 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 MAEAQ7L5Y9 396 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 CCDC65Q8IXS2 484 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 MDM1Q8TC05 714 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 NEK9Q8TD19 979 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 CCHCR1Q8TD31 782 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 ZKSCAN4Q969J2 545 aaPredicted RBP14.47□□□□□ -0.09
COL2A1-201ENST00000337299 GUCY1A2P33402 732 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 SMTNP53814 917 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 EXOSC10Q01780 885 aaKnown RBP14.47□□□□□ -0.09
COL2A1-201ENST00000337299 TSGA10IPQ3SY00 556 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 RETREG2Q8NC44 543 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 HDAC7Q8WUI4 952 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 CNOT10Q9H9A5 744 aaKnown RBP14.47□□□□□ -0.09
COL2A1-201ENST00000337299 ATP2A1O14983 1001 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 PRKAB2O43741 272 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 TRIM37O94972 964 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 RAD23BP54727 409 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 CROCCP2Q86T23 111 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 UBL4BQ8N7F7 174 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 ALDH8A1Q9H2A2 487 aaPredicted RBP14.47□□□□□ -0.09
COL2A1-201ENST00000337299 ECT2Q9H8V3 914 aa14.47□□□□□ -0.09
COL2A1-201ENST00000337299 UBE2Q2LH0YL09 131 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 POTEJP0CG39 1038 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms