RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 MAP3K20Q9NYL2 800 aaKnown RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 KIAA1024Q9UPX6 916 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 DISP2A7MBM2 1401 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 SCP2P22307 547 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 TECP42680 631 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 CKAP4Q07065 602 aaKnown RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 NFIAQ12857 509 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 CYB5R4Q7L1T6 521 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 RSPH3Q86UC2 560 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 SYMPKQ92797 1274 aaKnown RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 RIT2Q99578 217 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 ZNF577Q9BSK1 485 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 RTFDC1Q9BY42 306 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 INO80BQ9C086 356 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 TMEM206Q9H813 350 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 PKD2L1Q9P0L9 805 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 MRC1P22897 1456 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 BCL9LQ86UU0 1499 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 PALM3A6NDB9 673 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 PSMD14O00487 310 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 BCRP11274 1271 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 CLCN1P35523 988 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 LRRC63Q05C16 580 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 PPP1R2P3Q6NXS1 205 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 LDHDQ86WU2 507 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 GMCL1Q96IK5 515 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 AIFM3Q96NN9 605 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 PLIN2Q99541 437 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 CBX8Q9HC52 389 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 ADARB2Q9NS39 739 aaKnown RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 SPTA1P02549 2419 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 ASB14A6NK59 587 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 GADD45BO75293 160 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 BPIFB4P59827 614 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 CYP4A11Q02928 519 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 MRPL44Q9H9J2 332 aaKnown RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 KLRG2A4D1S0 409 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-201ENST00000335508 CXCL11O14625 94 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 RAPGEF1Q13905 1077 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 GUF1Q8N442 669 aaKnown RBP7.59□□□□□ -1.19
SF3B1-201ENST00000335508 KIFAP3Q92845 792 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 TMX2Q9Y320 296 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 ARHGEF37A1IGU5 675 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 EIF2AK2P19525 551 aaKnown RBP7.59□□□□□ -1.19
SF3B1-201ENST00000335508 DYMQ7RTS9 669 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 PRMT6Q96LA8 375 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-201ENST00000335508 DISC1Q9NRI5 854 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 KNDC1Q76NI1 1749 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 NR1I2O75469 434 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 CAP2P40123 477 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 SEC23AQ15436 765 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 ANGEL2Q5VTE6 544 aaKnown RBP7.59□□□□□ -1.19
SF3B1-201ENST00000335508 CEP135Q66GS9 1140 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 SNRNP48Q6IEG0 339 aaKnown RBP7.59□□□□□ -1.19
SF3B1-201ENST00000335508 PLCD4Q9BRC7 762 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 AP5M1Q9H0R1 490 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 PDHBP11177 359 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 ATP2C1P98194 919 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-201ENST00000335508 KARSQ15046 597 aaKnown RBP7.59□□□□□ -1.19
SF3B1-201ENST00000335508 EPHA7Q15375 998 aa7.59□□□□□ -1.19
SF3B1-201ENST00000335508 ZC3H15Q8WU90 426 aaKnown RBP7.59□□□□□ -1.19
SF3B1-201ENST00000335508 GOLGA6L10A6NI86 522 aa7.59□□□□□ -1.2
SF3B1-201ENST00000335508 CDC27P30260 824 aa7.59□□□□□ -1.2
SF3B1-201ENST00000335508 STAT1P42224 750 aa7.59□□□□□ -1.2
SF3B1-201ENST00000335508 NDUFA8P51970 172 aa7.59□□□□□ -1.2
SF3B1-201ENST00000335508 ENOX2Q16206 610 aaKnown RBP7.59□□□□□ -1.2
SF3B1-201ENST00000335508 SCYL3Q8IZE3 742 aa7.59□□□□□ -1.2
SF3B1-201ENST00000335508 GPC2Q8N158 579 aa7.59□□□□□ -1.2
SF3B1-201ENST00000335508 RASGRP4Q8TDF6 673 aa7.59□□□□□ -1.2
SF3B1-201ENST00000335508 STAMQ92783 540 aa7.59□□□□□ -1.2
SF3B1-201ENST00000335508 EDEM3Q9BZQ6 932 aa7.59□□□□□ -1.2
SF3B1-201ENST00000335508 CSRNP2Q9H175 543 aa7.59□□□□□ -1.2
SF3B1-201ENST00000335508 ZNF215Q9UL58 517 aaPredicted RBP7.59□□□□□ -1.2
SF3B1-201ENST00000335508 MAGEA1P43355 309 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 ZNF75DP51815 510 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 TRPC3Q13507 836 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 BAG1Q99933 345 aaPredicted RBP7.58□□□□□ -1.2
SF3B1-201ENST00000335508 CRACR2AQ9BSW2 395 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.58□□□□□ -1.2
SF3B1-201ENST00000335508 BHMT2Q9H2M3 363 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 HAUS4Q9H6D7 363 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 PARVGQ9HBI0 331 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 CNTRLQ7Z7A1 2325 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 FAM196BA6NMK8 535 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 ZBTB22O15209 634 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 GCLCP48506 637 aaPredicted RBP7.58□□□□□ -1.2
SF3B1-201ENST00000335508 HMGCS2P54868 508 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 NOLC1Q14978 699 aaKnown RBP eCLIP7.58□□□□□ -1.22e-10■■■□□ 14.9
SF3B1-201ENST00000335508 FAM83BQ5T0W9 1011 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 PDXDC2PQ6P474 469 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 CHST13Q8NET6 341 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 RDM1Q8NG50 284 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 PRR12Q9ULL5 1215 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 GINS2Q9Y248 185 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 PCDHB6Q9Y5E3 794 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 TMCO5BA8MYB1 307 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 HNRNPDLO14979 420 aaKnown RBP7.58□□□□□ -1.2
SF3B1-201ENST00000335508 P4HBP07237 508 aaKnown RBP7.58□□□□□ -1.2
SF3B1-201ENST00000335508 NR3C2P08235 984 aa7.58□□□□□ -1.2
SF3B1-201ENST00000335508 P4HA1P13674 534 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms