RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 C11orf57Q6ZUT1 292 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 ADGRF4Q8IZF3 695 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 KRI1Q8N9T8 703 aaKnown RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 RASGRP4Q8TDF6 673 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 GDAP1L1Q96MZ0 367 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 DESI2Q9BSY9 194 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 SENP2Q9HC62 589 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 FZD1Q9UP38 647 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 CETPP11597 493 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 ADKP55263 362 aaKnown RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 ETF1P62495 437 aaKnown RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 QRICH1Q2TAL8 776 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 LONRF3Q496Y0 759 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 BRDTQ58F21 947 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 KANK3Q6NY19 840 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 NLRX1Q86UT6 975 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 ADD3Q9UEY8 706 aaKnown RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 NFE2L3Q9Y4A8 694 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 C4AP0C0L4 1744 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 CHMP2AO43633 222 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 AKR1B10O60218 316 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 PDHBP11177 359 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 PPARDQ03181 441 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 SMC1AQ14683 1233 aaKnown RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 NEK8Q86SG6 692 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 CCDC113Q9H0I3 377 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 SEPT11Q9NVA2 429 aaKnown RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 STAT3P40763 770 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 NCBP1Q09161 790 aaKnown RBP13.13□□□□□ -0.31
HDAC6-201ENST00000334136 MTMR14Q8NCE2 650 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 KIAA1468Q9P260 1216 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 NOP56O00567 594 aaKnown RBP13.13□□□□□ -0.31
HDAC6-201ENST00000334136 STAT6P42226 847 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 UBXN2AP68543 259 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 PDE4DQ08499 809 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 FBXO40Q9UH90 709 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 DDX39AO00148 427 aaKnown RBP13.13□□□□□ -0.31
HDAC6-201ENST00000334136 ZEB2O60315 1214 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 ERLIN2O94905 339 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 BACE1P56817 501 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 CALCRLQ16602 461 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 ZSCAN26Q16670 478 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 RNF146Q9NTX7 359 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 MAPK8IP1Q9UQF2 711 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 SMIM22K7EJ46 135 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 SLURP2P0DP57 97 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 PRR16Q569H4 304 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 MAATS1Q7Z4T9 603 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
HDAC6-201ENST00000334136 SMC1BQ8NDV3 1235 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 KCNB2Q92953 911 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 KCNH3Q9ULD8 1083 aa13.13□□□□□ -0.31
HDAC6-201ENST00000334136 PFKFB3Q16875 520 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-201ENST00000334136 WWC2Q6AWC2 1192 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 IGSF22Q8N9C0 903 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 IMPACTQ9P2X3 320 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 ASTN2O75129 1339 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-201ENST00000334136 ELP1O95163 1332 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 ZC3H4Q9UPT8 1303 aaKnown RBP13.12□□□□□ -0.31
HDAC6-201ENST00000334136 AKR1B15C9JRZ8 316 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-201ENST00000334136 POLR2DO15514 142 aaKnown RBP13.12□□□□□ -0.31
HDAC6-201ENST00000334136 SEC31AO94979 1220 aaKnown RBP13.12□□□□□ -0.31
HDAC6-201ENST00000334136 HOXA13P31271 388 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-201ENST00000334136 RNF207Q6ZRF8 634 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 HDXQ7Z353 690 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.12□□□□□ -0.31
HDAC6-201ENST00000334136 VPS16Q9H269 839 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 MYO6Q9UM54 1294 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 NR5A1Q13285 461 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 TTC31Q49AM3 519 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-201ENST00000334136 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 ATRIPQ8WXE1 791 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 PGBD1Q96JS3 809 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 LRRC27Q9C0I9 530 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 TMX2Q9Y320 296 aa13.12□□□□□ -0.31
HDAC6-201ENST00000334136 ARHGAP6O43182 974 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 GTF2A2P52657 109 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 UBE2SQ16763 222 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 OPTNQ96CV9 577 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 PLIN2Q99541 437 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 SPZ1Q9BXG8 430 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 FOXP1Q9H334 677 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-201ENST00000334136 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 PRR12Q9ULL5 1215 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 MYH3P11055 1940 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 CNGA1P29973 690 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 TROAPQ12815 778 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 PNOCQ13519 176 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 FBXO38Q6PIJ6 1188 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 PLA2G4DQ86XP0 818 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 STAMQ92783 540 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 EBAG9O00559 213 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 MMP1P03956 469 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms