RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 GTF2IP78347 998 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 TDRD12Q587J7 1177 aaKnown RBP13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 WDR59Q6PJI9 974 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 UNC13DQ70J99 1090 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 CRACR2AQ9BSW2 395 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 NDST4Q9H3R1 872 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 REXO2Q9Y3B8 237 aaKnown RBP13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PVALEFA0A1B0GWK0 134 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 KRT18P05783 430 aaKnown RBP13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 VWA3BQ502W6 1294 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 TRAPPC11Q7Z392 1133 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 TRIM58Q8NG06 486 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 EXOC4Q96A65 974 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 L1RE1Q9UN81 338 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 AHDC1Q5TGY3 1603 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ESYT2A0FGR8 921 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 HERVK_113P62684 666 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MEA1Q16626 185 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MAN2A1Q16706 1144 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 LUC7LQ9NQ29 371 aaKnown RBP13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 POTEMA6NI47 508 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MAP2K7O14733 419 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 VAV2P52735 878 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 RRAGAQ7L523 313 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ERGIC2Q96RQ1 377 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ZHX3Q9H4I2 956 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 SUGCTQ9HAC7 445 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 A0A1B0GUL6 1792 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 RIMBP2O15034 1052 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 BBOX1O75936 387 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PDHBP11177 359 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 CAPN2P17655 700 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PRR5LQ6MZQ0 368 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 SCN7AQ01118 1682 aa13□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ANO9A1A5B4 782 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 TRAF5O00463 557 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 TDP2O95551 362 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 AMPD2Q01433 879 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 LRRC63Q05C16 580 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 CUL5Q93034 780 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MYMKA6NI61 221 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 HLA-DOAP06340 250 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 FIGNQ5HY92 759 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 SLC51AQ86UW1 340 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 GUF1Q8N442 669 aaKnown RBP12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MMS19Q96T76 1030 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 LACRTQ9GZZ8 138 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MTMR4Q9NYA4 1195 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 A0A1W2PQJ5 194 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 TTLL1O95922 423 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 SERPINB2P05120 415 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PAFAH1B1P43034 410 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 HNRNPH2P55795 449 aaKnown RBP12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MYOCDQ8IZQ8 938 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 KIAA0895Q8NCT3 520 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 DDX12PQ92771 950 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 DDX25Q9UHL0 483 aaKnown RBP12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 USP21Q9UK80 565 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PCDHA12Q9UN75 941 aa12.99□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MAGEA1P43355 309 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 USP14P54578 494 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PDIA5Q14554 519 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ZSCAN26Q16670 478 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 CENPPQ6IPU0 288 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 C15orf52Q6ZUT6 534 aaKnown RBP12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 GPIHBP1Q8IV16 184 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 TRIM34Q9BYJ4 488 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ZC3H12CQ9C0D7 883 aaKnown RBP12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 SEMA6BQ9H3T3 888 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MED4Q9NPJ6 270 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 SERPINB13Q9UIV8 391 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 H3BQF6 201 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 GRB10Q13322 594 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 LRRC41Q15345 812 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PAPD7Q5XG87 772 aaKnown RBP12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 KRT26Q7Z3Y9 468 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 FAM71BQ8TC56 605 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 RAD54LQ92698 747 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 RIC8AQ9NPQ8 531 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 FAN1Q9Y2M0 1017 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 JRKLQ9Y4A0 524 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PNMA6FA0A0J9YX94 578 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 IL1R1P14778 569 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MATR3P43243 847 aaKnown RBP eCLIP12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 KIF11P52732 1056 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PSMD2Q13200 908 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 WDR93Q6P2C0 686 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 LRRC15Q8TF66 581 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MMTAG2Q9BU76 263 aaKnown RBP12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 UBXN6Q9BZV1 441 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PLAGL2Q9UPG8 496 aa12.98□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MYH8P13535 1937 aa12.97□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ZBTB22O15209 634 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms