RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 CCT2P78371 535 aaKnown RBP11.22□□□□□ -0.61
SYN3-201ENST00000332840 ACVR2BQ13705 512 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 PKP1Q13835 747 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 MUM1L1Q5H9M0 696 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 LARP1BQ659C4 914 aaKnown RBP11.22□□□□□ -0.61
SYN3-201ENST00000332840 SYNE3Q6ZMZ3 975 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 NFXL1Q6ZNB6 911 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 RNF207Q6ZRF8 634 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 FBXO11Q86XK2 927 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 ADGRF4Q8IZF3 695 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 DEFB123Q8N688 67 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 DNERQ8NFT8 737 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 SMARCC2Q8TAQ2 1214 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 UBA5Q9GZZ9 404 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 LY9Q9HBG7 655 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
SYN3-201ENST00000332840 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
SYN3-201ENST00000332840 MRPL11Q9Y3B7 192 aaKnown RBP11.22□□□□□ -0.61
SYN3-201ENST00000332840 PALM3A6NDB9 673 aaPredicted RBP11.21□□□□□ -0.61
SYN3-201ENST00000332840 GOLGA8BA8MQT2 603 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 NFIBO00712 420 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 ZBTB5O15062 677 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 DUSP11O75319 330 aaKnown RBP11.21□□□□□ -0.61
SYN3-201ENST00000332840 BAG4O95429 457 aaKnown RBP11.21□□□□□ -0.61
SYN3-201ENST00000332840 ZSCAN22P10073 491 aaPredicted RBP11.21□□□□□ -0.61
SYN3-201ENST00000332840 GNAQP50148 359 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 RCAN1P53805 252 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 CNTN2Q02246 1040 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 TROAPQ12815 778 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 BAATQ14032 418 aaPredicted RBP11.21□□□□□ -0.61
SYN3-201ENST00000332840 GRM4Q14833 912 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 PRAMEF19Q5SWL8 479 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 CPLX2Q6PUV4 134 aaKnown RBP11.21□□□□□ -0.61
SYN3-201ENST00000332840 APOA5Q6Q788 366 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 CCDC144CPQ8IYA2 1237 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 SAMD3Q8N6K7 520 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 FAM184AQ8NB25 1140 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.61
SYN3-201ENST00000332840 CTCFLQ8NI51 663 aaPredicted RBP11.21□□□□□ -0.61
SYN3-201ENST00000332840 CLEC4DQ8WXI8 215 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 FGD4Q96M96 766 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 LZTS2Q9BRK4 669 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 TSEN34Q9BSV6 310 aaKnown RBP11.21□□□□□ -0.61
SYN3-201ENST00000332840 AMNQ9BXJ7 453 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 VTA1Q9NP79 307 aa11.21□□□□□ -0.61
SYN3-201ENST00000332840 ZNFX1Q9P2E3 1918 aaKnown RBP11.2□□□□□ -0.62
SYN3-201ENST00000332840 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 MOXD2PA6NHM9 499 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 CPLX1O14810 134 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 ZBTB43O43298 467 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 TAL1P17542 331 aaPredicted RBP11.2□□□□□ -0.62
SYN3-201ENST00000332840 SMARCA1P28370 1054 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 METAP2P50579 478 aaKnown RBP eCLIP11.2□□□□□ -0.62
SYN3-201ENST00000332840 RPS6P62753 249 aaKnown RBP11.2□□□□□ -0.62
SYN3-201ENST00000332840 LRRC41Q15345 812 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 QRICH1Q2TAL8 776 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 CCDC144BQ3MJ40 725 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 USH1GQ495M9 461 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 PCSK9Q8NBP7 692 aaKnown RBP11.2□□□□□ -0.62
SYN3-201ENST00000332840 MORC4Q8TE76 937 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 SENP6Q9GZR1 1112 aaPredicted RBP11.2□□□□□ -0.62
SYN3-201ENST00000332840 MAP3K20Q9NYL2 800 aaKnown RBP11.2□□□□□ -0.62
SYN3-201ENST00000332840 MAD2L2Q9UI95 211 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 ATP6V1DQ9Y5K8 247 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 SLC12A7Q9Y666 1083 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 PARP14Q460N5 1801 aa11.2□□□□□ -0.62
SYN3-201ENST00000332840 MYH4Q9Y623 1939 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 JAK2O60674 1132 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 CDKL5O76039 1030 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 CTDNEP1O95476 244 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 CALML3P27482 149 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 CST5P28325 142 aaPredicted RBP11.19□□□□□ -0.62
SYN3-201ENST00000332840 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
SYN3-201ENST00000332840 PPP2R5BQ15173 497 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 GJC2Q5T442 439 aaPredicted RBP11.19□□□□□ -0.62
SYN3-201ENST00000332840 C1orf53Q5VUE5 145 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 FOXD4L5Q5VV16 416 aaPredicted RBP11.19□□□□□ -0.62
SYN3-201ENST00000332840 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 NUP133Q8WUM0 1156 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 FOXD4L4Q8WXT5 416 aaPredicted RBP11.19□□□□□ -0.62
SYN3-201ENST00000332840 MTMR8Q96EF0 704 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 RIOX1Q9H6W3 641 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 NCOA5Q9HCD5 579 aaKnown RBP11.19□□□□□ -0.62
SYN3-201ENST00000332840 PHF24Q9UPV7 400 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 MTMR6Q9Y217 621 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 Q9Y3F1 56 aa11.19□□□□□ -0.62
SYN3-201ENST00000332840 NID2Q14112 1375 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 VCANP13611 3396 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 SYNRGQ9UMZ2 1314 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 PNMA6FA0A0J9YX94 578 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 CCDC196A0A1B0GTZ2 297 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
SYN3-201ENST00000332840 GOLGA8AA7E2F4 631 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 ADAMTS4O75173 837 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 F13A1P00488 732 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 PGK1P00558 417 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 MAGEA10P43363 369 aaPredicted RBP11.18□□□□□ -0.62
SYN3-201ENST00000332840 TNFAIP2Q03169 654 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 PDE4DQ08499 809 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms