RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 TMTC2Q8N394 836 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 CNNM1Q9NRU3 951 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 BAIAP2L1Q9UHR4 511 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 PLAGL2Q9UPG8 496 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 ERICH2A1L162 156 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 LCA5LO95447 670 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 MCAMP43121 646 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 KIF11P52732 1056 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 EVA1CP58658 441 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 HLFQ16534 295 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 EARS2Q5JPH6 523 aaKnown RBP26.87■■□□□ 1.89
SOX1-201ENST00000330949 TTC38Q5R3I4 469 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 FANCBQ8NB91 859 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 CASKIN2Q8WXE0 1202 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 TATDN2Q93075 761 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 CCDC47Q96A33 483 aaKnown RBP26.87■■□□□ 1.89
SOX1-201ENST00000330949 UBAC1Q9BSL1 405 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 GREM2Q9H772 168 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 PMS1P54277 932 aaKnown RBP26.86■■□□□ 1.89
SOX1-201ENST00000330949 TCIRG1Q13488 830 aa26.86■■□□□ 1.89
SOX1-201ENST00000330949 ACCSLQ4AC99 568 aa26.86■■□□□ 1.89
SOX1-201ENST00000330949 CCHCR1Q8TD31 782 aa26.86■■□□□ 1.89
SOX1-201ENST00000330949 NSMCE1Q8WV22 266 aa26.86■■□□□ 1.89
SOX1-201ENST00000330949 TBC1D31Q96DN5 1066 aa26.86■■□□□ 1.89
SOX1-201ENST00000330949 NCK2O43639 380 aa26.86■■□□□ 1.89
SOX1-201ENST00000330949 SKAP2O75563 359 aaPredicted RBP26.86■■□□□ 1.89
SOX1-201ENST00000330949 KLK7P49862 253 aa26.86■■□□□ 1.89
SOX1-201ENST00000330949 AP1ARQ63HQ0 302 aa26.86■■□□□ 1.89
SOX1-201ENST00000330949 PHF20Q9BVI0 1012 aa26.86■■□□□ 1.89
SOX1-201ENST00000330949 TYW1BQ6NUM6 668 aa26.85■■□□□ 1.89
SOX1-201ENST00000330949 ATP2C2O75185 946 aa26.85■■□□□ 1.89
SOX1-201ENST00000330949 PLEKP08567 350 aaPredicted RBP26.85■■□□□ 1.89
SOX1-201ENST00000330949 HIBCHQ6NVY1 386 aaPredicted RBP26.85■■□□□ 1.89
SOX1-201ENST00000330949 EIF1ADQ8N9N8 165 aaKnown RBP26.85■■□□□ 1.89
SOX1-201ENST00000330949 NOX5Q96PH1 765 aa26.85■■□□□ 1.89
SOX1-201ENST00000330949 INHBEP58166 350 aa26.85■■□□□ 1.89
SOX1-201ENST00000330949 BYSLQ13895 437 aaKnown RBP26.85■■□□□ 1.89
SOX1-201ENST00000330949 AKNAD1Q5T1N1 836 aa26.85■■□□□ 1.89
SOX1-201ENST00000330949 LMBR1Q8WVP7 490 aa26.85■■□□□ 1.89
SOX1-201ENST00000330949 MS4A14Q96JA4 679 aa26.85■■□□□ 1.89
SOX1-201ENST00000330949 AKR1B10O60218 316 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 PPP2R2AP63151 447 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 RIPK1Q13546 671 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 ODF2Q5BJF6 829 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 CPLX4Q7Z7G2 160 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 NUP133Q8WUM0 1156 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 ERGIC2Q96RQ1 377 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 TAF1DQ9H5J8 278 aaPredicted RBP26.84■■□□□ 1.89
SOX1-201ENST00000330949 TMOD3Q9NYL9 352 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 GRID2IPA4D2P6 1211 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 PJA2O43164 708 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 ITGA6P23229 1130 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 ADCY2Q08462 1091 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 MYO1EQ12965 1108 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 PPP1R7Q15435 360 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 MFSD6Q6ZSS7 791 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 FAM114A1Q8IWE2 563 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 RNF10Q8N5U6 811 aaKnown RBP26.84■■□□□ 1.89
SOX1-201ENST00000330949 NAPBQ9H115 298 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 ARHGAP20Q9P2F6 1191 aa26.84■■□□□ 1.89
SOX1-201ENST00000330949 KDM4FA0A1W2PPD8 638 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 WNT7AO00755 349 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 PPIP5K2O43314 1243 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 IL2RBP14784 551 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 KCNB1Q14721 858 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 KLHDC7AQ5VTJ3 777 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 C2CD5Q86YS7 1000 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 CSGALNACT2Q8N6G5 542 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 SAAL1Q96ER3 474 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 MTA3Q9BTC8 594 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 SWAP70Q9UH65 585 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 C15orf41Q9Y2V0 281 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 PKD1L3Q7Z443 1732 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 TTI2Q6NXR4 508 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 KIF6Q6ZMV9 814 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 RAPGEF5Q92565 580 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 LRRC45Q96CN5 670 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 SPAG5Q96R06 1193 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 HOMER3Q9NSC5 361 aa26.83■■□□□ 1.89
SOX1-201ENST00000330949 PPP2R5BQ15173 497 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 CDCA2Q69YH5 1023 aaPredicted RBP26.82■■□□□ 1.88
SOX1-201ENST00000330949 STAMBPL1Q96FJ0 436 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 KRT12Q99456 494 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 ZNF532Q9HCE3 1301 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 ANKRD33BA6NCL7 494 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 TMOD1P28289 359 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 MAGEA1P43355 309 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 SEMA3FQ13275 785 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 ZNF654Q8IZM8 581 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 STRBPQ96SI9 672 aaKnown RBP26.82■■□□□ 1.88
SOX1-201ENST00000330949 KIF9Q9HAQ2 790 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 MYH2Q9UKX2 1941 aa26.82■■□□□ 1.88
SOX1-201ENST00000330949 HSD17B3P37058 310 aa26.81■■□□□ 1.88
SOX1-201ENST00000330949 EIF4A3P38919 411 aaKnown RBP26.81■■□□□ 1.88
SOX1-201ENST00000330949 AGBL2Q5U5Z8 902 aa26.81■■□□□ 1.88
SOX1-201ENST00000330949 SHISA4Q96DD7 197 aa26.81■■□□□ 1.88
SOX1-201ENST00000330949 ISCA1Q9BUE6 129 aa26.81■■□□□ 1.88
SOX1-201ENST00000330949 TRPC6Q9Y210 931 aa26.81■■□□□ 1.88
SOX1-201ENST00000330949 ERVV-2B6SEH9 535 aa26.81■■□□□ 1.88
SOX1-201ENST00000330949 STAT6P42226 847 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms