RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 LRRC53A6NM62 1247 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 CYP19A1P11511 503 aaPredicted RBP16.01■□□□□ 0.15
SNX20-202ENST00000330943 HNRNPH3P31942 346 aaKnown RBP16.01■□□□□ 0.15
SNX20-202ENST00000330943 IGHMBP2P38935 993 aaKnown RBP16.01■□□□□ 0.15
SNX20-202ENST00000330943 FNTAP49354 379 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 GUCY2FP51841 1108 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 SETQ01105 290 aaPredicted RBP16.01■□□□□ 0.15
SNX20-202ENST00000330943 GUCY2DQ02846 1103 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 NAA35Q5VZE5 725 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 KDM7AQ6ZMT4 941 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 MTMR8Q96EF0 704 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 EPB41L5Q9HCM4 733 aa16.01■□□□□ 0.15
SNX20-202ENST00000330943 ATXN2Q99700 1313 aaKnown RBP16■□□□□ 0.15
SNX20-202ENST00000330943 HEXIM1O94992 359 aaKnown RBP16■□□□□ 0.15
SNX20-202ENST00000330943 ERCC3P19447 782 aa16■□□□□ 0.15
SNX20-202ENST00000330943 MAP2K2P36507 400 aa16■□□□□ 0.15
SNX20-202ENST00000330943 GYG1P46976 350 aa16■□□□□ 0.15
SNX20-202ENST00000330943 RASSF7Q02833 373 aa16■□□□□ 0.15
SNX20-202ENST00000330943 CHRNDQ07001 517 aa16■□□□□ 0.15
SNX20-202ENST00000330943 CABP7Q86V35 215 aa16■□□□□ 0.15
SNX20-202ENST00000330943 DLEC1Q9Y238 1755 aa16■□□□□ 0.15
SNX20-202ENST00000330943 TNKS1BP1Q9C0C2 1729 aaKnown RBP16■□□□□ 0.15
SNX20-202ENST00000330943 DCCP43146 1447 aa16■□□□□ 0.15
SNX20-202ENST00000330943 ZPR1O75312 459 aa16■□□□□ 0.15
SNX20-202ENST00000330943 NR1D1P20393 614 aa16■□□□□ 0.15
SNX20-202ENST00000330943 ATP2B2Q01814 1243 aa16■□□□□ 0.15
SNX20-202ENST00000330943 CFAP221Q4G0U5 840 aa16■□□□□ 0.15
SNX20-202ENST00000330943 EPN3Q9H201 632 aa16■□□□□ 0.15
SNX20-202ENST00000330943 SIK3Q9Y2K2 1263 aa16■□□□□ 0.15
SNX20-202ENST00000330943 WTIPA6NIX2 430 aaPredicted RBP15.99■□□□□ 0.15
SNX20-202ENST00000330943 FSBPO95073 299 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 FGRP09769 529 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 GSCP56915 257 aaPredicted RBP15.99■□□□□ 0.15
SNX20-202ENST00000330943 GFPT1Q06210 699 aaPredicted RBP15.99■□□□□ 0.15
SNX20-202ENST00000330943 PAK2Q13177 524 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 VWA3BQ502W6 1294 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 RNF187Q5TA31 235 aaPredicted RBP15.99■□□□□ 0.15
SNX20-202ENST00000330943 SUSD4Q5VX71 490 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 SPATS2Q86XZ4 545 aaKnown RBP15.99■□□□□ 0.15
SNX20-202ENST00000330943 ZNF34Q8IZ26 560 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 IQCKQ8N0W5 287 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 NDST4Q9H3R1 872 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 KCNQ2O43526 872 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 LCA5LO95447 670 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 PCP11498 1178 aaKnown RBP15.99■□□□□ 0.15
SNX20-202ENST00000330943 KIF5BP33176 963 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 SEC24CP53992 1094 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 SLC4A8Q2Y0W8 1093 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 GLE1Q53GS7 698 aaKnown RBP15.99■□□□□ 0.15
SNX20-202ENST00000330943 KLHDC7AQ5VTJ3 777 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 MICALCLQ6ZW33 695 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 TMC4Q7Z404 712 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 ZNF473Q8WTR7 871 aaKnown RBP15.99■□□□□ 0.15
SNX20-202ENST00000330943 NOX5Q96PH1 765 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.99■□□□□ 0.15
SNX20-202ENST00000330943 SLIT2O94813 1529 aa15.99■□□□□ 0.15
SNX20-202ENST00000330943 TSPY2A6NKD2 308 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 SLC1A4P43007 532 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 SEMA3FQ13275 785 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 TXNRD1Q16881 649 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 IQCDQ96DY2 449 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 SEMA6BQ9H3T3 888 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 CXorf56Q9H5V9 222 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 SLC39A2Q9NP94 309 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 TCP11L1Q9NUJ3 509 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 FLT1P17948 1338 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 PPP1R37O75864 691 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 TDRD12Q587J7 1177 aaKnown RBP15.98■□□□□ 0.15
SNX20-202ENST00000330943 KIAA0895Q8NCT3 520 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 JPH2Q9BR39 696 aaPredicted RBP15.98■□□□□ 0.15
SNX20-202ENST00000330943 GDF3Q9NR23 364 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 PCDHA6Q9UN73 950 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 PCDHA8Q9Y5H6 950 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 PTGISQ16647 500 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 STAG2Q8N3U4 1231 aa15.98■□□□□ 0.15
SNX20-202ENST00000330943 CYP2D6P10635 497 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 HDLBPQ00341 1268 aaKnown RBP15.97■□□□□ 0.15
SNX20-202ENST00000330943 PPARDQ03181 441 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 CCDC152Q4G0S7 254 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 PTF1AQ7RTS3 328 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 PIK3R5Q8WYR1 880 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 CUEDC2Q9H467 287 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 MTMR7Q9Y216 660 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 COL1A1P02452 1464 aaPredicted RBP15.97■□□□□ 0.15
SNX20-202ENST00000330943 ERVV-1B6SEH8 477 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 PJA2O43164 708 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 ORC4O43929 436 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 RNASE9P60153 205 aaKnown RBP15.97■□□□□ 0.15
SNX20-202ENST00000330943 CACNA2D4Q7Z3S7 1137 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 HEATR3Q7Z4Q2 680 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 MAATS1Q7Z4T9 603 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 CCDC155Q8N6L0 562 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 ZNF384Q8TF68 577 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 KRT12Q99456 494 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 MAGEF1Q9HAY2 307 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 NHSL1Q5SYE7 1610 aa15.97■□□□□ 0.15
SNX20-202ENST00000330943 COL22A1Q8NFW1 1626 aaPredicted RBP15.97■□□□□ 0.15
SNX20-202ENST00000330943 M0R2N6 131 aa15.96■□□□□ 0.15
SNX20-202ENST00000330943 FTCDO95954 541 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms