RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 GCOM1H8Y6P7 765 aaPredicted RBP20.15■□□□□ 0.82
SOCS3-201ENST00000330871 MYZAPP0CAP1 466 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 PRLRP16471 622 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 CTDSPL2Q05D32 466 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 LACTB2Q53H82 288 aaPredicted RBP20.15■□□□□ 0.82
SOCS3-201ENST00000330871 THEMIS2Q5TEJ8 643 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 CCDC26Q8TAB7 109 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 SHISA4Q96DD7 197 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 TLR10Q9BXR5 811 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 YIPF3Q9GZM5 350 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 EBF2Q9HAK2 575 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 C15orf41Q9Y2V0 281 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 PDS5AQ29RF7 1337 aaKnown RBP20.15■□□□□ 0.82
SOCS3-201ENST00000330871 DEXIO95424 95 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 IFNL3Q8IZI9 196 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 NUP133Q8WUM0 1156 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 TRIM47Q96LD4 638 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 NAPBQ9H115 298 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 AKAP11Q9UKA4 1901 aa20.14■□□□□ 0.82
SOCS3-201ENST00000330871 TCRBV5S4A2TA0A5A2 114 aa20.14■□□□□ 0.82
SOCS3-201ENST00000330871 ANKRD33BA6NCL7 494 aa20.14■□□□□ 0.82
SOCS3-201ENST00000330871 DNAJC8O75937 253 aaPredicted RBP20.14■□□□□ 0.82
SOCS3-201ENST00000330871 RPN1P04843 607 aaKnown RBP20.14■□□□□ 0.82
SOCS3-201ENST00000330871 ZBED6P86452 979 aa20.14■□□□□ 0.82
SOCS3-201ENST00000330871 RTN1Q16799 776 aa20.14■□□□□ 0.82
SOCS3-201ENST00000330871 NBPF9Q3BBW0 867 aa20.14■□□□□ 0.82
SOCS3-201ENST00000330871 GKAP1Q5VSY0 366 aaPredicted RBP20.14■□□□□ 0.82
SOCS3-201ENST00000330871 ALS2CR12Q96Q35 445 aa20.14■□□□□ 0.82
SOCS3-201ENST00000330871 KRT23Q9C075 422 aa20.14■□□□□ 0.82
SOCS3-201ENST00000330871 CNNM1Q9NRU3 951 aa20.14■□□□□ 0.82
SOCS3-201ENST00000330871 NID2Q14112 1375 aa20.14■□□□□ 0.81
SOCS3-201ENST00000330871 PCDH11XQ9BZA7 1347 aa20.14■□□□□ 0.81
SOCS3-201ENST00000330871 PCDH11YQ9BZA8 1340 aa20.14■□□□□ 0.81
SOCS3-201ENST00000330871 DCDC2CA8MYV0 355 aa20.14■□□□□ 0.81
SOCS3-201ENST00000330871 UPP2O95045 317 aa20.14■□□□□ 0.81
SOCS3-201ENST00000330871 HLTFQ14527 1009 aaKnown RBP eCLIP20.14■□□□□ 0.81
SOCS3-201ENST00000330871 RRP12Q5JTH9 1297 aaKnown RBP20.14■□□□□ 0.81
SOCS3-201ENST00000330871 TBC1D1Q86TI0 1168 aaPredicted RBP20.14■□□□□ 0.81
SOCS3-201ENST00000330871 MREGQ8N565 214 aa20.14■□□□□ 0.81
SOCS3-201ENST00000330871 ZCRB1Q8TBF4 217 aaKnown RBP20.14■□□□□ 0.81
SOCS3-201ENST00000330871 EXOC1Q9NV70 894 aa20.14■□□□□ 0.81
SOCS3-201ENST00000330871 ZNF330Q9Y3S2 320 aaPredicted RBP20.14■□□□□ 0.81
SOCS3-201ENST00000330871 PRDM1O75626 825 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 ITGA6P23229 1130 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 AKNAD1Q5T1N1 836 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 ZNF570Q96NI8 536 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 BATF3Q9NR55 127 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 SRRM3A6NNA2 597 aaPredicted RBP20.13■□□□□ 0.81
SOCS3-201ENST00000330871 NKRFO15226 690 aaKnown RBP eCLIP20.13■□□□□ 0.81
SOCS3-201ENST00000330871 SRGNP10124 158 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 DNM2P50570 870 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 CFAP221Q4G0U5 840 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 C2CD5Q86YS7 1000 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 CRACR2BQ8N4Y2 399 aaPredicted RBP20.13■□□□□ 0.81
SOCS3-201ENST00000330871 PROCA1Q8NCQ7 364 aaPredicted RBP20.13■□□□□ 0.81
SOCS3-201ENST00000330871 TTLL11Q8NHH1 800 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 TUBGCP2Q9BSJ2 902 aa20.13■□□□□ 0.81
SOCS3-201ENST00000330871 MAGEC2Q9UBF1 373 aaPredicted RBP20.13■□□□□ 0.81
SOCS3-201ENST00000330871 PPIP5K2O43314 1243 aa20.12■□□□□ 0.81
SOCS3-201ENST00000330871 ICA1Q05084 483 aa20.12■□□□□ 0.81
SOCS3-201ENST00000330871 PDXDC2PQ6P474 469 aa20.12■□□□□ 0.81
SOCS3-201ENST00000330871 MFSD6Q6ZSS7 791 aa20.12■□□□□ 0.81
SOCS3-201ENST00000330871 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.12■□□□□ 0.81
SOCS3-201ENST00000330871 ARHGAP20Q9P2F6 1191 aa20.12■□□□□ 0.81
SOCS3-201ENST00000330871 CPSF2Q9P2I0 782 aaKnown RBP20.12■□□□□ 0.81
SOCS3-201ENST00000330871 PARP4Q9UKK3 1724 aaKnown RBP20.12■□□□□ 0.81
SOCS3-201ENST00000330871 GTPBP6O43824 516 aaPredicted RBP20.12■□□□□ 0.81
SOCS3-201ENST00000330871 UQCRFS1P1P0C7P4 283 aa20.12■□□□□ 0.81
SOCS3-201ENST00000330871 HSD17B3P37058 310 aa20.12■□□□□ 0.81
SOCS3-201ENST00000330871 MIS18BP1Q6P0N0 1132 aa20.12■□□□□ 0.81
SOCS3-201ENST00000330871 TMC4Q7Z404 712 aa20.12■□□□□ 0.81
SOCS3-201ENST00000330871 EPB41L4AQ9HCS5 686 aaPredicted RBP20.12■□□□□ 0.81
SOCS3-201ENST00000330871 NOVA2Q9UNW9 492 aaKnown RBP20.12■□□□□ 0.81
SOCS3-201ENST00000330871 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
SOCS3-201ENST00000330871 DIAPH2O60879 1101 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 PDE8BO95263 885 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 KIF11P52732 1056 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 WTAPQ15007 396 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 KLHL7Q8IXQ5 586 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 CCDC63Q8NA47 563 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 AGAP11Q8TF27 550 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 MTMR8Q96EF0 704 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 GREM2Q9H772 168 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 TACC3Q9Y6A5 838 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 ARID4AP29374 1257 aaPredicted RBP20.11■□□□□ 0.81
SOCS3-201ENST00000330871 EIF4A3P38919 411 aaKnown RBP20.11■□□□□ 0.81
SOCS3-201ENST00000330871 PHKA1P46020 1223 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 PTGDRQ13258 359 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 KLHDC7AQ5VTJ3 777 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 KIF6Q6ZMV9 814 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 TMTC2Q8N394 836 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 VGLL2Q8N8G2 317 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 MDM1Q8TC05 714 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 DDX17Q92841 729 aaKnown RBP20.11■□□□□ 0.81
SOCS3-201ENST00000330871 KDM4CQ9H3R0 1056 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 PANK4Q9NVE7 773 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 ZNF142P52746 1687 aaPredicted RBP20.11■□□□□ 0.81
SOCS3-201ENST00000330871 C5orf60A6NFR6 353 aa20.11■□□□□ 0.81
SOCS3-201ENST00000330871 SMNDC1O75940 238 aaKnown RBP eCLIP20.11■□□□□ 0.81
SOCS3-201ENST00000330871 SNUPNO95149 360 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms