RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 HOXA13P31271 388 aaPredicted RBP17.08■□□□□ 0.32
CLRN1-203ENST00000328863 NAPAP54920 295 aa17.08■□□□□ 0.32
CLRN1-203ENST00000328863 AKAP17AQ02040 695 aaKnown RBP17.08■□□□□ 0.32
CLRN1-203ENST00000328863 GJC2Q5T442 439 aaPredicted RBP17.08■□□□□ 0.32
CLRN1-203ENST00000328863 TLK2Q86UE8 772 aa17.08■□□□□ 0.32
CLRN1-203ENST00000328863 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
CLRN1-203ENST00000328863 SCFD2Q8WU76 684 aa17.08■□□□□ 0.32
CLRN1-203ENST00000328863 TBC1D5Q92609 795 aa17.08■□□□□ 0.32
CLRN1-203ENST00000328863 GPKOWQ92917 476 aaPredicted RBP eCLIP17.08■□□□□ 0.32
CLRN1-203ENST00000328863 TAAR1Q96RJ0 339 aa17.08■□□□□ 0.32
CLRN1-203ENST00000328863 UPF2Q9HAU5 1272 aaKnown RBP17.08■□□□□ 0.32
CLRN1-203ENST00000328863 DDX49Q9Y6V7 483 aaKnown RBP17.08■□□□□ 0.32
CLRN1-203ENST00000328863 FRMPD4Q14CM0 1322 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 hCG_1642624A0A1W2PR95 340 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 PIK3CDO00329 1044 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 ADCY6O43306 1168 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 C6orf222P0C671 652 aaPredicted RBP17.07■□□□□ 0.32
CLRN1-203ENST00000328863 CST5P28325 142 aaPredicted RBP17.07■□□□□ 0.32
CLRN1-203ENST00000328863 FUT2Q10981 343 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 STXBP2Q15833 593 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 WWC2Q6AWC2 1192 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 IQSEC1Q6DN90 963 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 CPLX2Q6PUV4 134 aaKnown RBP17.07■□□□□ 0.32
CLRN1-203ENST00000328863 FCHSD1Q86WN1 690 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 TEX2Q8IWB9 1127 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 DPF3Q92784 378 aa17.07■□□□□ 0.32
CLRN1-203ENST00000328863 UPF3AQ9H1J1 476 aaKnown RBP17.07■□□□□ 0.32
CLRN1-203ENST00000328863 FAM217BQ9NTX9 383 aaPredicted RBP17.07■□□□□ 0.32
CLRN1-203ENST00000328863 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.06■□□□□ 0.32
CLRN1-203ENST00000328863 MOXD2PA6NHM9 499 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 CPLX1O14810 134 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 NKRFO15226 690 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLRN1-203ENST00000328863 SEC24BO95487 1268 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 PDIA3P30101 505 aaKnown RBP17.06■□□□□ 0.32
CLRN1-203ENST00000328863 CCND2P30279 289 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
CLRN1-203ENST00000328863 GJA9P57773 515 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 TTLL4Q14679 1199 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 PRPF38BQ5VTL8 546 aaKnown RBP17.06■□□□□ 0.32
CLRN1-203ENST00000328863 TAPT1Q6NXT6 567 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 TRIM22Q8IYM9 498 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 PCSK9Q8NBP7 692 aaKnown RBP17.06■□□□□ 0.32
CLRN1-203ENST00000328863 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
CLRN1-203ENST00000328863 ZNF274Q96GC6 653 aaPredicted RBP17.06■□□□□ 0.32
CLRN1-203ENST00000328863 PDCD2LQ9BRP1 358 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 RNF26Q9BY78 433 aaPredicted RBP17.06■□□□□ 0.32
CLRN1-203ENST00000328863 AP5M1Q9H0R1 490 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 EHMT1Q9H9B1 1298 aa17.06■□□□□ 0.32
CLRN1-203ENST00000328863 SPDYE3A6NKU9 549 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 EVI5O60447 810 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 SCG2P13521 617 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 SMPD1P17405 629 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 CCT2P78371 535 aaKnown RBP17.05■□□□□ 0.32
CLRN1-203ENST00000328863 PGM5Q15124 567 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 PFKFB3Q16875 520 aaPredicted RBP17.05■□□□□ 0.32
CLRN1-203ENST00000328863 DUSP28Q4G0W2 176 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 TSEN34Q9BSV6 310 aaKnown RBP17.05■□□□□ 0.32
CLRN1-203ENST00000328863 WDR11Q9BZH6 1224 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 SENP6Q9GZR1 1112 aaPredicted RBP17.05■□□□□ 0.32
CLRN1-203ENST00000328863 GLT8D2Q9H1C3 349 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 PDGFCQ9NRA1 345 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 BARHL2Q9NY43 387 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 PHF24Q9UPV7 400 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 GNEQ9Y223 722 aaKnown RBP17.05■□□□□ 0.32
CLRN1-203ENST00000328863 Q9Y3F1 56 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 NR2E3Q9Y5X4 410 aa17.05■□□□□ 0.32
CLRN1-203ENST00000328863 V9GY48 417 aaPredicted RBP17.05■□□□□ 0.32
CLRN1-203ENST00000328863 RBM47A0AV96 593 aaKnown RBP17.04■□□□□ 0.32
CLRN1-203ENST00000328863 ZEB2O60315 1214 aa17.04■□□□□ 0.32
CLRN1-203ENST00000328863 EIF3JO75822 258 aaKnown RBP17.04■□□□□ 0.32
CLRN1-203ENST00000328863 CDKL5O76039 1030 aa17.04■□□□□ 0.32
CLRN1-203ENST00000328863 NR3C2P08235 984 aa17.04■□□□□ 0.32
CLRN1-203ENST00000328863 MYCLP12524 364 aaPredicted RBP17.04■□□□□ 0.32
CLRN1-203ENST00000328863 IFNAR1P17181 557 aa17.04■□□□□ 0.32
CLRN1-203ENST00000328863 ADCY7P51828 1080 aa17.04■□□□□ 0.32
CLRN1-203ENST00000328863 AK2P54819 239 aa17.04■□□□□ 0.32
CLRN1-203ENST00000328863 CCDC148Q8NFR7 591 aa17.04■□□□□ 0.32
CLRN1-203ENST00000328863 ALDH8A1Q9H2A2 487 aaPredicted RBP17.04■□□□□ 0.32
CLRN1-203ENST00000328863 A0A1W2PQ45 241 aaPredicted RBP17.03■□□□□ 0.32
CLRN1-203ENST00000328863 A0A1W2PQY0 241 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 MYADML2A6NDP7 307 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 STXBP3O00186 592 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
CLRN1-203ENST00000328863 STAM2O75886 525 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 CPT1AP50416 773 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 NKX3-2P78367 333 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 STK3Q13188 491 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 FSCN1Q16658 493 aaKnown RBP17.03■□□□□ 0.32
CLRN1-203ENST00000328863 GNPTABQ3T906 1256 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 BRDTQ58F21 947 aaPredicted RBP17.03■□□□□ 0.32
CLRN1-203ENST00000328863 USP17L6PQ6QN14 398 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 KLHDC9Q8NEP7 349 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 OR6J1Q8NGC5 347 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 PHKBQ93100 1093 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 GLT1D1Q96MS3 346 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 SLC26A6Q9BXS9 759 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 SLKQ9H2G2 1235 aaPredicted RBP17.03■□□□□ 0.32
CLRN1-203ENST00000328863 NCOA5Q9HCD5 579 aaKnown RBP17.03■□□□□ 0.32
CLRN1-203ENST00000328863 STARD7Q9NQZ5 370 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms