RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 BMS1Q14692 1282 aaKnown RBP17.77■□□□□ 0.43
SYNM-201ENST00000328642 SLC35F6Q8N357 371 aa17.77■□□□□ 0.43
SYNM-201ENST00000328642 P2RX5Q93086 422 aa17.77■□□□□ 0.43
SYNM-201ENST00000328642 EPN1Q9Y6I3 576 aaPredicted RBP17.77■□□□□ 0.43
SYNM-201ENST00000328642 ATP2C1P98194 919 aaPredicted RBP17.76■□□□□ 0.43
SYNM-201ENST00000328642 PKN1Q16512 942 aa17.76■□□□□ 0.43
SYNM-201ENST00000328642 NAPGQ99747 312 aaPredicted RBP17.76■□□□□ 0.43
SYNM-201ENST00000328642 NPHP3-ACAD11A0A0J9YXS1 232 aa17.76■□□□□ 0.43
SYNM-201ENST00000328642 ZBTB5O15062 677 aa17.76■□□□□ 0.43
SYNM-201ENST00000328642 KLHL30Q0D2K2 578 aa17.76■□□□□ 0.43
SYNM-201ENST00000328642 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.76■□□□□ 0.43
SYNM-201ENST00000328642 EPB41P11171 864 aaKnown RBP17.76■□□□□ 0.43
SYNM-201ENST00000328642 PDHBP11177 359 aa17.76■□□□□ 0.43
SYNM-201ENST00000328642 PPP4R3AQ6IN85 833 aa17.76■□□□□ 0.43
SYNM-201ENST00000328642 GALNT17Q6IS24 598 aa17.76■□□□□ 0.43
SYNM-201ENST00000328642 MIER3Q7Z3K6 550 aa17.76■□□□□ 0.43
SYNM-201ENST00000328642 TRAF1Q13077 416 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 BIRC3Q13489 604 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 ADAT2Q7Z6V5 191 aaKnown RBP17.75■□□□□ 0.43
SYNM-201ENST00000328642 PRMT6Q96LA8 375 aaPredicted RBP17.75■□□□□ 0.43
SYNM-201ENST00000328642 IFIH1Q9BYX4 1025 aaKnown RBP17.75■□□□□ 0.43
SYNM-201ENST00000328642 TRIM31Q9BZY9 425 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 TACC3Q9Y6A5 838 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 SPATA31A6Q5VVP1 1343 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 TICAM2Q86XR7 235 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 TMEM39BQ9GZU3 492 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 DHX36Q9H2U1 1008 aaKnown RBP17.75■□□□□ 0.43
SYNM-201ENST00000328642 FRMD4BQ9Y2L6 1034 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 NR2F2P24468 414 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 FAM178BQ8IXR5 827 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 NT5C3AQ9H0P0 336 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 FBXO28Q9NVF7 368 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.75■□□□□ 0.43
SYNM-201ENST00000328642 RGL1Q9NZL6 768 aa17.75■□□□□ 0.43
SYNM-201ENST00000328642 GPR75-ASB3A0A0A6YYF3 556 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 WNT7AO00755 349 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 RPL13P26373 211 aaKnown RBP17.74■□□□□ 0.43
SYNM-201ENST00000328642 ODR4Q5SWX8 454 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 IQCEQ6IPM2 695 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 CRAMP1Q96RY5 1269 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 DDX4Q9NQI0 724 aaKnown RBP17.74■□□□□ 0.43
SYNM-201ENST00000328642 TFR2Q9UP52 801 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 PLA2G4BP0C869 781 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 DNM2P50570 870 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 SBK1Q52WX2 424 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 FAM102BQ5T8I3 360 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 KRT222Q8N1A0 295 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 TXLNBQ8N3L3 684 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 ZBED4O75132 1171 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 SEC31AO94979 1220 aaKnown RBP17.74■□□□□ 0.43
SYNM-201ENST00000328642 SPP2Q13103 211 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 UTP14CQ5TAP6 766 aaKnown RBP17.74■□□□□ 0.43
SYNM-201ENST00000328642 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 MAP3K14Q99558 947 aa17.74■□□□□ 0.43
SYNM-201ENST00000328642 RTFDC1Q9BY42 306 aaPredicted RBP17.74■□□□□ 0.43
SYNM-201ENST00000328642 ARMCX3Q9UH62 379 aaPredicted RBP17.74■□□□□ 0.43
SYNM-201ENST00000328642 DDTLA6NHG4 134 aaPredicted RBP17.73■□□□□ 0.43
SYNM-201ENST00000328642 STK4Q13043 487 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 SHROOM1Q2M3G4 852 aaPredicted RBP17.73■□□□□ 0.43
SYNM-201ENST00000328642 XKR9Q5GH70 373 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 ARHGEF16Q5VV41 709 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 ZNF577Q9BSK1 485 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 RAVER2Q9HCJ3 691 aaKnown RBP17.73■□□□□ 0.43
SYNM-201ENST00000328642 TMOD4Q9NZQ9 345 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 MAD2L2Q9UI95 211 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 RABGAP1Q9Y3P9 1069 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 HOOK2Q96ED9 719 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
SYNM-201ENST00000328642 ECE1P42892 770 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 CIAPIN1Q6FI81 312 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 LEKR1Q6ZMV7 388 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 TMEM179Q6ZVK1 233 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 TBC1D5Q92609 795 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 PDE4DIPQ5VU43 2346 aa17.73■□□□□ 0.43
SYNM-201ENST00000328642 STXBP3O00186 592 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 NDUFB10O96000 172 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 KRT5P13647 590 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 ARHGAP4P98171 946 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 TCP11X2Q5H9J9 407 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 SLIT3O75094 1523 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 STX10O60499 249 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 SRGNP10124 158 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 SF3A3Q12874 501 aaKnown RBP eCLIP17.72■□□□□ 0.43
SYNM-201ENST00000328642 SARM1Q6SZW1 724 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 KLHL7Q8IXQ5 586 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 SMIM23A6NLE4 172 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 MAATS1Q7Z4T9 603 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 CD44P16070 742 aaKnown RBP17.72■□□□□ 0.43
SYNM-201ENST00000328642 RASSF7Q02833 373 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 SLC9C1Q4G0N8 1177 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 ARL6IP4Q66PJ3 421 aaKnown RBP17.72■□□□□ 0.43
SYNM-201ENST00000328642 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 ACER1Q8TDN7 264 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 SUGCTQ9HAC7 445 aa17.72■□□□□ 0.43
SYNM-201ENST00000328642 GOLGA6L10A6NI86 522 aa17.71■□□□□ 0.43
SYNM-201ENST00000328642 LRRN2O75325 713 aa17.71■□□□□ 0.43
SYNM-201ENST00000328642 DLATP10515 647 aaKnown RBP17.71■□□□□ 0.43
SYNM-201ENST00000328642 XRCC5P13010 732 aaKnown RBP17.71■□□□□ 0.43
SYNM-201ENST00000328642 ZNF543Q08ER8 600 aa17.71■□□□□ 0.43
SYNM-201ENST00000328642 SECISBP2LQ93073 1101 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms