RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 ATP1A3P13637 1013 aa16.03■□□□□ 0.16
CHEK2-201ENST00000328354 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
CHEK2-201ENST00000328354 INPP5BP32019 993 aa16.03■□□□□ 0.16
CHEK2-201ENST00000328354 GRB10Q13322 594 aa16.03■□□□□ 0.16
CHEK2-201ENST00000328354 ZNF658Q5TYW1 1059 aaPredicted RBP16.03■□□□□ 0.16
CHEK2-201ENST00000328354 CCDC186Q7Z3E2 898 aa16.03■□□□□ 0.16
CHEK2-201ENST00000328354 SCYL3Q8IZE3 742 aa16.03■□□□□ 0.16
CHEK2-201ENST00000328354 WDR18Q9BV38 432 aa16.03■□□□□ 0.16
CHEK2-201ENST00000328354 XPO4Q9C0E2 1151 aaKnown RBP16.03■□□□□ 0.16
CHEK2-201ENST00000328354 KCNF1Q9H3M0 494 aa16.03■□□□□ 0.16
CHEK2-201ENST00000328354 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
CHEK2-201ENST00000328354 FBXO28Q9NVF7 368 aa16.03■□□□□ 0.16
CHEK2-201ENST00000328354 IFNKQ9P0W0 207 aa16.03■□□□□ 0.16
CHEK2-201ENST00000328354 MRPL11Q9Y3B7 192 aaKnown RBP16.03■□□□□ 0.16
CHEK2-201ENST00000328354 NFE2L3Q9Y4A8 694 aa16.03■□□□□ 0.16
CHEK2-201ENST00000328354 POTEMA6NI47 508 aa16.02■□□□□ 0.16
CHEK2-201ENST00000328354 KLRC4O43908 158 aa16.02■□□□□ 0.16
CHEK2-201ENST00000328354 TAL1P17542 331 aaPredicted RBP16.02■□□□□ 0.16
CHEK2-201ENST00000328354 YY1P25490 414 aa16.02■□□□□ 0.16
CHEK2-201ENST00000328354 ZNF830Q96NB3 372 aaPredicted RBP16.02■□□□□ 0.16
CHEK2-201ENST00000328354 PNMA5Q96PV4 448 aa16.02■□□□□ 0.16
CHEK2-201ENST00000328354 PLIN2Q99541 437 aa16.02■□□□□ 0.16
CHEK2-201ENST00000328354 C7orf25Q9BPX7 421 aa16.02■□□□□ 0.16
CHEK2-201ENST00000328354 GGA3Q9NZ52 723 aa16.02■□□□□ 0.16
CHEK2-201ENST00000328354 NRBP1Q9UHY1 535 aa16.02■□□□□ 0.16
CHEK2-201ENST00000328354 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.15
CHEK2-201ENST00000328354 RHOBTB3O94955 611 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 PTGS1P23219 599 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 EPS15P42566 896 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 HIRAP54198 1017 aaPredicted RBP16.01■□□□□ 0.15
CHEK2-201ENST00000328354 TMEM119Q4V9L6 283 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 HYIQ5T013 277 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 KRT79Q5XKE5 535 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 CCDC174Q6PII3 467 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 SLFN12Q8IYM2 578 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 PRPF38AQ8NAV1 312 aaKnown RBP16.01■□□□□ 0.15
CHEK2-201ENST00000328354 ETNPPLQ8TBG4 499 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 SLF1Q9BQI6 1058 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 BLOC1S4Q9NUP1 217 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 PCDHA12Q9UN75 941 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 SSC5DA1L4H1 1573 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 CBFA2T2O43439 604 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 ICAM1P05362 532 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 USP14P54578 494 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 AMPD3Q01432 767 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 CCDC144BQ3MJ40 725 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 SPATA1Q5VX52 437 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 LDHDQ86WU2 507 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 LENG9Q96B70 501 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 TRIM9Q9C026 710 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 IMPACTQ9P2X3 320 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 RBBP6Q7Z6E9 1792 aaKnown RBP16.01■□□□□ 0.15
CHEK2-201ENST00000328354 ZNF536O15090 1300 aa16.01■□□□□ 0.15
CHEK2-201ENST00000328354 RLFQ13129 1914 aa16■□□□□ 0.15
CHEK2-201ENST00000328354 GCOM1H8Y6P7 765 aaPredicted RBP16■□□□□ 0.15
CHEK2-201ENST00000328354 POLR2MP0CAP2 368 aa16■□□□□ 0.15
CHEK2-201ENST00000328354 HOXA13P31271 388 aaPredicted RBP16■□□□□ 0.15
CHEK2-201ENST00000328354 TRMT44Q8IYL2 757 aaKnown RBP16■□□□□ 0.15
CHEK2-201ENST00000328354 SNX29Q8TEQ0 813 aa16■□□□□ 0.15
CHEK2-201ENST00000328354 SYNRGQ9UMZ2 1314 aa16■□□□□ 0.15
CHEK2-201ENST00000328354 MARCH6O60337 910 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 GHRHRQ02643 423 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 KMT5BQ4FZB7 885 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 CNNM4Q6P4Q7 775 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 SMYD4Q8IYR2 804 aaPredicted RBP15.99■□□□□ 0.15
CHEK2-201ENST00000328354 FAM20AQ96MK3 541 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 WRNIP1Q96S55 665 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 NUDT12Q9BQG2 462 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 GTPBP4Q9BZE4 634 aaKnown RBP15.99■□□□□ 0.15
CHEK2-201ENST00000328354 AS3MTQ9HBK9 375 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 EMILIN3Q9NT22 766 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 KDM3AQ9Y4C1 1321 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 FAM86B1E9PN63 330 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 CFBP00751 764 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 FAM86B2P0C5J1 330 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 PTPRAP18433 802 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 VCAM1P19320 739 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 UBASH3AP57075 661 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 MTMR2Q13614 643 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 PRR16Q569H4 304 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 NOL9Q5SY16 702 aaKnown RBP15.99■□□□□ 0.15
CHEK2-201ENST00000328354 TBC1D5Q92609 795 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 LARP4BQ92615 738 aaKnown RBP15.99■□□□□ 0.15
CHEK2-201ENST00000328354 KLRG1Q96E93 195 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 CDK5RAP3Q96JB5 506 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 RWDD2AQ9UIY3 292 aa15.99■□□□□ 0.15
CHEK2-201ENST00000328354 SERPINC1P01008 464 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 HSD17B4P51659 736 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 BACE1P56817 501 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 GSDMDP57764 484 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 SPIRE1Q08AE8 756 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 CDKAL1Q5VV42 579 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 KLHL10Q6JEL2 608 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 SV2BQ7L1I2 683 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 ADSSL1Q8N142 457 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 GIMAP8Q8ND71 665 aaPredicted RBP15.98■□□□□ 0.15
CHEK2-201ENST00000328354 RAD54LQ92698 747 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 C12orf42Q96LP6 360 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 NT5C3AQ9H0P0 336 aa15.98■□□□□ 0.15
CHEK2-201ENST00000328354 EHMT1Q9H9B1 1298 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms