RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 DCAF15Q66K64 600 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 TMC6Q7Z403 805 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 FILIP1Q7Z7B0 1213 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 APOBEC3FQ8IUX4 373 aaKnown RBP16.79■□□□□ 0.28
TPM3-205ENST00000328159 SNX29Q8TEQ0 813 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 CACTINQ8WUQ7 758 aaKnown RBP16.79■□□□□ 0.28
TPM3-205ENST00000328159 CDK5RAP3Q96JB5 506 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 KCNMB3Q9NPA1 279 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 FBXO28Q9NVF7 368 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 STK17AQ9UEE5 414 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 SBF1O95248 1867 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 CDK11BP21127 795 aaKnown RBP16.79■□□□□ 0.28
TPM3-205ENST00000328159 HOXA13P31271 388 aaPredicted RBP16.79■□□□□ 0.28
TPM3-205ENST00000328159 GSDMDP57764 484 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 AMPD3Q01432 767 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 KMT5BQ4FZB7 885 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 KIAA1524Q8TCG1 905 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 TRPM4Q8TD43 1214 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 C7orf25Q9BPX7 421 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 KIAA1683Q9H0B3 1180 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 SAMSN1Q9NSI8 373 aaKnown RBP16.79■□□□□ 0.28
TPM3-205ENST00000328159 GPRC5DQ9NZD1 345 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 PCDHA12Q9UN75 941 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 CTNND2Q9UQB3 1225 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 WDR46O15213 610 aaKnown RBP16.78■□□□□ 0.28
TPM3-205ENST00000328159 INPP5BP32019 993 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 Q4G0T1 1027 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 HSP90AA4PQ58FG1 418 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 ANGEL2Q5VTE6 544 aaKnown RBP16.78■□□□□ 0.28
TPM3-205ENST00000328159 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
TPM3-205ENST00000328159 LRRC8AQ8IWT6 810 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 GPC2Q8N158 579 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 LPAR1Q92633 364 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 GJA10Q969M2 543 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 NAP1L5Q96NT1 182 aaPredicted RBP16.78■□□□□ 0.28
TPM3-205ENST00000328159 TRIM9Q9C026 710 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 BLOC1S4Q9NUP1 217 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 GDAQ9Y2T3 454 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 MRPL11Q9Y3B7 192 aaKnown RBP16.78■□□□□ 0.28
TPM3-205ENST00000328159 ABCB11O95342 1321 aa16.78■□□□□ 0.28
TPM3-205ENST00000328159 RHOBTB3O94955 611 aa16.77■□□□□ 0.28
TPM3-205ENST00000328159 ARID5BQ14865 1188 aa16.77■□□□□ 0.28
TPM3-205ENST00000328159 TMEM119Q4V9L6 283 aa16.77■□□□□ 0.28
TPM3-205ENST00000328159 SV2BQ7L1I2 683 aa16.77■□□□□ 0.28
TPM3-205ENST00000328159 SLFN12Q8IYM2 578 aa16.77■□□□□ 0.28
TPM3-205ENST00000328159 CCDC47Q96A33 483 aaKnown RBP16.77■□□□□ 0.28
TPM3-205ENST00000328159 NUDT12Q9BQG2 462 aa16.77■□□□□ 0.28
TPM3-205ENST00000328159 RWDD2AQ9UIY3 292 aa16.77■□□□□ 0.28
TPM3-205ENST00000328159 GCOM1H8Y6P7 765 aaPredicted RBP16.77■□□□□ 0.27
TPM3-205ENST00000328159 TBX3O15119 743 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 CFBP00751 764 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 CYP3A4P08684 503 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 POLR2MP0CAP2 368 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 CIITAP33076 1130 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 PAK1Q13153 545 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 NOLC1Q14978 699 aaKnown RBP eCLIP16.77■□□□□ 0.27
TPM3-205ENST00000328159 PRR16Q569H4 304 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 LDHDQ86WU2 507 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 C17orf53Q8N3J3 647 aaPredicted RBP16.77■□□□□ 0.27
TPM3-205ENST00000328159 RAD54LQ92698 747 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 SLF1Q9BQI6 1058 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 ZNF112Q9UJU3 913 aa16.77■□□□□ 0.27
TPM3-205ENST00000328159 SLC26A4O43511 780 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 OFD1O75665 1012 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 PRCPP42785 496 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 ASIC1P78348 528 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 DHX8Q14562 1220 aaKnown RBP16.76■□□□□ 0.27
TPM3-205ENST00000328159 CDKAL1Q5VV42 579 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 FCHSD1Q86WN1 690 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 VSTM4Q8IW00 320 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 ADSSL1Q8N142 457 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 ETNPPLQ8TBG4 499 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 NELFBQ8WX92 580 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 TBC1D5Q92609 795 aa16.76■□□□□ 0.27
TPM3-205ENST00000328159 LARP4BQ92615 738 aaKnown RBP16.76■□□□□ 0.27
TPM3-205ENST00000328159 FHDC1Q9C0D6 1143 aaPredicted RBP16.76■□□□□ 0.27
TPM3-205ENST00000328159 FAM86B1E9PN63 330 aa16.75■□□□□ 0.27
TPM3-205ENST00000328159 FAM86B2P0C5J1 330 aa16.75■□□□□ 0.27
TPM3-205ENST00000328159 MCM6Q14566 821 aa16.75■□□□□ 0.27
TPM3-205ENST00000328159 SCYL3Q8IZE3 742 aa16.75■□□□□ 0.27
TPM3-205ENST00000328159 PRPF38AQ8NAV1 312 aaKnown RBP16.75■□□□□ 0.27
TPM3-205ENST00000328159 GIMAP8Q8ND71 665 aaPredicted RBP16.75■□□□□ 0.27
TPM3-205ENST00000328159 LENG9Q96B70 501 aa16.75■□□□□ 0.27
TPM3-205ENST00000328159 UIMC1Q96RL1 719 aa16.75■□□□□ 0.27
TPM3-205ENST00000328159 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
TPM3-205ENST00000328159 INTS13Q9NVM9 706 aa16.75■□□□□ 0.27
TPM3-205ENST00000328159 GGA3Q9NZ52 723 aa16.75■□□□□ 0.27
TPM3-205ENST00000328159 KDM3AQ9Y4C1 1321 aa16.75■□□□□ 0.27
TPM3-205ENST00000328159 ICAM1P05362 532 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 CCT6AP40227 531 aaKnown RBP16.74■□□□□ 0.27
TPM3-205ENST00000328159 EPS15P42566 896 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 TPD52L1Q16890 204 aaPredicted RBP16.74■□□□□ 0.27
TPM3-205ENST00000328159 HYIQ5T013 277 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.74■□□□□ 0.27
TPM3-205ENST00000328159 CCDC150Q8NCX0 1101 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 FAM20AQ96MK3 541 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 GTPBP4Q9BZE4 634 aaKnown RBP16.74■□□□□ 0.27
TPM3-205ENST00000328159 EXOC1Q9NV70 894 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 MAPK8IP1Q9UQF2 711 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms