RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 CCDC155Q8N6L0 562 aa16.19■□□□□ 0.18
SSBP3-201ENST00000326956 IFT81Q8WYA0 676 aa16.19■□□□□ 0.18
SSBP3-201ENST00000326956 HPS3Q969F9 1004 aa16.19■□□□□ 0.18
SSBP3-201ENST00000326956 EHD2Q9NZN4 543 aa16.19■□□□□ 0.18
SSBP3-201ENST00000326956 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
SSBP3-201ENST00000326956 STX8Q9UNK0 236 aa16.19■□□□□ 0.18
SSBP3-201ENST00000326956 LRRC53A6NM62 1247 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 BUB1O43683 1085 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 ZEB2O60315 1214 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 CRKLP46109 303 aaKnown RBP16.18■□□□□ 0.18
SSBP3-201ENST00000326956 RASSF7Q02833 373 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 SF3B2Q13435 895 aaKnown RBP16.18■□□□□ 0.18
SSBP3-201ENST00000326956 SBK1Q52WX2 424 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 GLE1Q53GS7 698 aaKnown RBP16.18■□□□□ 0.18
SSBP3-201ENST00000326956 SOGA3Q5TF21 947 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 HAUS3Q68CZ6 603 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 ZNF572Q7Z3I7 529 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-201ENST00000326956 DAGLBQ8NCG7 672 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 ZNF384Q8TF68 577 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 ARL8AQ96BM9 186 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 SH3GL2Q99962 352 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 BARHL2Q9NY43 387 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 ZNF652Q9Y2D9 606 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 TSPY3P0CV98 308 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 TSPY8P0CW00 308 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 ERCC3P19447 782 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 ATP1A2P50993 1020 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 PDCLQ13371 301 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 GRM4Q14833 912 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 KCTD16Q68DU8 428 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 ZNF444Q8N0Y2 327 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-201ENST00000326956 TSEN2Q8NCE0 465 aaKnown RBP16.18■□□□□ 0.18
SSBP3-201ENST00000326956 CAMTA2O94983 1202 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 USP17L8P0C7I0 530 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 GUCY2CP25092 1073 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 PAK2Q13177 524 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 DZIP1Q86YF9 867 aaKnown RBP16.18■□□□□ 0.18
SSBP3-201ENST00000326956 TSG101Q99816 390 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 C6orf50Q9HD87 102 aa16.18■□□□□ 0.18
SSBP3-201ENST00000326956 BSDC1Q9NW68 430 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-201ENST00000326956 EPB41P11171 864 aaKnown RBP16.17■□□□□ 0.18
SSBP3-201ENST00000326956 NNTQ13423 1086 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 LRRC15Q8TF66 581 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 CAVIN3Q969G5 261 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 CCDC43Q96MW1 224 aaKnown RBP16.17■□□□□ 0.18
SSBP3-201ENST00000326956 SEMA6BQ9H3T3 888 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 RBM12Q9NTZ6 932 aaKnown RBP16.17■□□□□ 0.18
SSBP3-201ENST00000326956 CICQ96RK0 1608 aaPredicted RBP16.17■□□□□ 0.18
SSBP3-201ENST00000326956 COL1A1P02452 1464 aaPredicted RBP16.17■□□□□ 0.18
SSBP3-201ENST00000326956 STXBP3O00186 592 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 GNA11P29992 359 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 SETQ01105 290 aaPredicted RBP16.17■□□□□ 0.18
SSBP3-201ENST00000326956 CENPPQ6IPU0 288 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 DYMQ7RTS9 669 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 OTUD6BQ8N6M0 293 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 MINPP1Q9UNW1 487 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 SIK3Q9Y2K2 1263 aa16.17■□□□□ 0.18
SSBP3-201ENST00000326956 M0R2N6 131 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 EPHB6O15197 1021 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 PRDX5P30044 214 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 MNAT1P51948 309 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 APBA1Q02410 837 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 GFPT1Q06210 699 aaPredicted RBP16.16■□□□□ 0.18
SSBP3-201ENST00000326956 INTS5Q6P9B9 1019 aaKnown RBP16.16■□□□□ 0.18
SSBP3-201ENST00000326956 NEK8Q86SG6 692 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 DHX37Q8IY37 1157 aaKnown RBP16.16■□□□□ 0.18
SSBP3-201ENST00000326956 KIAA0895Q8NCT3 520 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 ZIM3Q96PE6 472 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 EPB41L5Q9HCM4 733 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 RNF14Q9UBS8 474 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 MAD2L2Q9UI95 211 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 FLT1P17948 1338 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 STRCP1A6NGW2 1772 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 HEXIM1O94992 359 aaKnown RBP16.16■□□□□ 0.18
SSBP3-201ENST00000326956 HIBADHP31937 336 aaKnown RBP16.16■□□□□ 0.18
SSBP3-201ENST00000326956 TXKP42681 527 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 SKOR1P84550 965 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 ATP2B2Q01814 1243 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 GUCY2DQ02846 1103 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 TTMPQ5BVD1 217 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 MICALCLQ6ZW33 695 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 RNF10Q8N5U6 811 aaKnown RBP16.16■□□□□ 0.18
SSBP3-201ENST00000326956 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 NFU1Q9UMS0 254 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 SLIT2O94813 1529 aa16.16■□□□□ 0.18
SSBP3-201ENST00000326956 SMCO2A6NFE2 343 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 SLC9C1Q4G0N8 1177 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 TMED8Q6PL24 325 aaPredicted RBP16.15■□□□□ 0.18
SSBP3-201ENST00000326956 SUGP1Q8IWZ8 645 aaKnown RBP16.15■□□□□ 0.18
SSBP3-201ENST00000326956 SH2D3CQ8N5H7 860 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 MS4A14Q96JA4 679 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 NLRC4Q9NPP4 1024 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 IL17RBQ9NRM6 502 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 SEC63Q9UGP8 760 aaKnown RBP16.15■□□□□ 0.18
SSBP3-201ENST00000326956 JAG2Q9Y219 1238 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 GRIN2DO15399 1336 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 ITGB4P16144 1822 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 USP17L3A6NCW0 530 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 USP17L4A6NCW7 530 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 KRT14P02533 472 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms