RNA–Protein interactions for RNA: ENST00000324727.8

SCN4B-201, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4B, Length 4,484 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-201ENST00000324727 PABPC4Q13310 644 aaKnown RBP eCLIP12.8□□□□□ -0.36
SCN4B-201ENST00000324727 SEPT2Q15019 361 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 CFAP221Q4G0U5 840 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 SH2D4BQ5SQS7 431 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 ABCB6Q9NP58 842 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 FANCLQ9NW38 375 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 KRT19P08727 400 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 BMP3P12645 472 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 MUM1Q2TAK8 710 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 BRDTQ58F21 947 aaPredicted RBP12.8□□□□□ -0.36
SCN4B-201ENST00000324727 XKR9Q5GH70 373 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 CNNM4Q6P4Q7 775 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 C11orf57Q6ZUT1 292 aaPredicted RBP12.8□□□□□ -0.36
SCN4B-201ENST00000324727 KLHL7Q8IXQ5 586 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 SMYD4Q8IYR2 804 aaPredicted RBP12.8□□□□□ -0.36
SCN4B-201ENST00000324727 ZNF341Q9BYN7 854 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 IQCGQ9H095 443 aaKnown RBP12.8□□□□□ -0.36
SCN4B-201ENST00000324727 GLT8D2Q9H1C3 349 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 SYNRGQ9UMZ2 1314 aa12.8□□□□□ -0.36
SCN4B-201ENST00000324727 TECPR2O15040 1411 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 CAMTA2O94983 1202 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 EZH2Q15910 746 aaKnown RBP12.79□□□□□ -0.36
SCN4B-201ENST00000324727 TMC4Q7Z404 712 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 CCDC51Q96ER9 411 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 DDX25Q9UHL0 483 aaKnown RBP12.79□□□□□ -0.36
SCN4B-201ENST00000324727 TRPC6Q9Y210 931 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 MEIS1O00470 390 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 PFDN1O60925 122 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 PRPHP41219 470 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 MAGEA1P43355 309 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 DBN1Q16643 649 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 RTKN2Q8IZC4 609 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 SLC35F6Q8N357 371 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCN4B-201ENST00000324727 TRIM31Q9BZY9 425 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 MRPL11Q9Y3B7 192 aaKnown RBP12.79□□□□□ -0.36
SCN4B-201ENST00000324727 UBN2Q6ZU65 1347 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 CALCOCO2Q13137 446 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 MAP7Q14244 749 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 PTPROQ16827 1216 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 TBCKQ8TEA7 893 aa12.79□□□□□ -0.36
SCN4B-201ENST00000324727 DCP1AQ9NPI6 582 aaPredicted RBP12.79□□□□□ -0.36
SCN4B-201ENST00000324727 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 EPB41P11171 864 aaKnown RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 ARHGAP44Q17R89 818 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 LRRC23Q53EV4 343 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 FAM102BQ5T8I3 360 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 DPP9Q86TI2 863 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 NELFBQ8WX92 580 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 CCDC127Q96BQ5 260 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 DNAI2Q9GZS0 605 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 GEMIN8Q9NWZ8 242 aaKnown RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 FAM184BQ9ULE4 1060 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 KIAA1024Q9UPX6 916 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 ZDHHC9Q9Y397 364 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 CARMIL3Q8ND23 1372 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 SH2B2O14492 632 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 CTNNA1P35221 906 aaKnown RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 PPM1FP49593 454 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 TRIM28Q13263 835 aaKnown RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 HIBCHQ6NVY1 386 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 SYMPKQ92797 1274 aaKnown RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 MCUR1Q96AQ8 359 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 NOX5Q96PH1 765 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 PCDHA5Q9Y5H7 936 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 ZMYND10O75800 440 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 EIF2AK2P19525 551 aaKnown RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 STRN3Q13033 797 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 ARMC2Q8NEN0 867 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 GJA10Q969M2 543 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 CSRNP2Q9H175 543 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 HAUS4Q9H6D7 363 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 CAMSAP1Q5T5Y3 1602 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 CD19P15391 556 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 ADRA2BP18089 450 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 SPP2Q13103 211 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 PDIA6Q15084 440 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 SUPT20HL1Q3ZLR7 823 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 RAB3IL1Q8TBN0 382 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 NAP1L4Q99733 375 aaKnown RBP12.78□□□□□ -0.36
SCN4B-201ENST00000324727 BRIP1Q9BX63 1249 aa12.78□□□□□ -0.36
SCN4B-201ENST00000324727 CSPG5O95196 566 aa12.77□□□□□ -0.36
SCN4B-201ENST00000324727 MTMR3Q13615 1198 aa12.77□□□□□ -0.36
SCN4B-201ENST00000324727 PODNQ7Z5L7 613 aa12.77□□□□□ -0.36
SCN4B-201ENST00000324727 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.36
SCN4B-201ENST00000324727 PPP1R16BQ96T49 567 aa12.77□□□□□ -0.36
SCN4B-201ENST00000324727 VCX3BQ9H321 246 aa12.77□□□□□ -0.36
SCN4B-201ENST00000324727 ZHX2Q9Y6X8 837 aa12.77□□□□□ -0.36
SCN4B-201ENST00000324727 SPATA31A5Q5VU36 1347 aa12.77□□□□□ -0.37
SCN4B-201ENST00000324727 SPATA31A7Q8IWB4 1347 aa12.77□□□□□ -0.37
SCN4B-201ENST00000324727 DDAH1O94760 285 aa12.77□□□□□ -0.37
SCN4B-201ENST00000324727 GOLGA8FQ08AF8 430 aa12.77□□□□□ -0.37
SCN4B-201ENST00000324727 GOLGA8DPQ0D2H9 430 aa12.77□□□□□ -0.37
SCN4B-201ENST00000324727 LRRC41Q15345 812 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms