RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 MED10Q9BTT4 135 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 PCDHB6Q9Y5E3 794 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 WDR17Q8IZU2 1322 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 SARNPP82979 210 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 KIAA0825Q8IV33 1275 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.93□□□□□ -0.55e-12■□□□□ 9
SNRNP200-201ENST00000323853 PANX2Q96RD6 677 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 NHEJ1Q9H9Q4 299 aaPredicted RBP11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 FAM114A2Q9NRY5 505 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 STK17AQ9UEE5 414 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 ERVV-1B6SEH8 477 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 YARSP54577 528 aaKnown RBP11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 GABPAQ06546 454 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 NR5A1Q13285 461 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 TOB2Q14106 344 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 LRCH2Q5VUJ6 765 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 ACRBPQ8NEB7 543 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 RILPQ96NA2 401 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 AMNQ9BXJ7 453 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 SAMSN1Q9NSI8 373 aaKnown RBP11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 SH3BP5O60239 455 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 MOCS3O95396 460 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 ATF7P17544 494 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 ZSWIM5Q9P217 1185 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 IFNAR1P17181 557 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 NR2F2P24468 414 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 EPHB4P54760 987 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 CYP4A11Q02928 519 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 LRRC41Q15345 812 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 ANKRD20A3Q5VUR7 823 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 ZNF577Q9BSK1 485 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 HAUS2Q9NVX0 235 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 GJA10Q969M2 543 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 ABCA6Q8N139 1617 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 POLGP54098 1239 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 SCYL2Q6P3W7 929 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 PHLDB2Q86SQ0 1253 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 ZNF408Q9H9D4 720 aa11.92□□□□□ -0.5
SNRNP200-201ENST00000323853 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 VCXQ9H320 206 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 ST7Q9NRC1 585 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 ODR4Q5SWX8 454 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 FAM160B1Q5W0V3 765 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 TTC19Q6DKK2 380 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 RPAP1Q9BWH6 1393 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 HOXA7P31268 230 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 TCP11X2Q5H9J9 407 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 TRIM50Q86XT4 487 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 CTAGE3PQ8IX95 158 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 PPP4R1Q8TF05 950 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 HAUS1Q96CS2 278 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 ACCSQ96QU6 501 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 SH3GLB2Q9NR46 395 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 ALKQ9UM73 1620 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 MAN1A1P33908 653 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 CCDC17Q96LX7 622 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 BAIAP2L1Q9UHR4 511 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 PTPN22Q9Y2R2 807 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 NSFP46459 744 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 PSMD2Q13200 908 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 PABPC4Q13310 644 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■■■□□ 15.3
SNRNP200-201ENST00000323853 KMT5BQ4FZB7 885 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 ANKRD13CQ8N6S4 541 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 HINFPQ9BQA5 517 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 PFDN4Q9NQP4 134 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 LARSQ9P2J5 1176 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 PCDHA13Q9Y5I0 950 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 RNF17Q9BXT8 1623 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 ERBB3P21860 1342 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 KAZNQ674X7 775 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 BCAS4Q8TDM0 211 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 NRKQ7Z2Y5 1582 aa11.91□□□□□ -0.5
SNRNP200-201ENST00000323853 CACNB1Q02641 598 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 BFSP1Q12934 665 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 SEPT2Q15019 361 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 AOC3Q16853 763 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 SEPT14Q6ZU15 432 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 ANKFY1Q9P2R3 1169 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 H7C1W4 665 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 CCDC170Q8IYT3 715 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 RPUSD2Q8IZ73 545 aaKnown RBP11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 POMGNT1Q8WZA1 660 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 RIOK1Q9BRS2 568 aaKnown RBP11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 IFNB1P01574 187 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 DMTNQ08495 405 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 BSPRYQ5W0U4 402 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 MMS19Q96T76 1030 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 NRBP2Q9NSY0 501 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 LIFRP42702 1097 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 MECOMQ03112 1051 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 NAA35Q5VZE5 725 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 TRIM11Q96F44 468 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 PAGR1Q9BTK6 254 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 PPP1R12CQ9BZL4 782 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 NEDD4P46934 1319 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 LRRC7Q96NW7 1537 aa11.9□□□□□ -0.5
SNRNP200-201ENST00000323853 GIPC1O14908 333 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms