RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 PARP1P09874 1014 aaKnown RBP14.43□□□□□ -0.1
TPM3-204ENST00000323144 FOSL2P15408 326 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 IFIT1BQ5T764 474 aaKnown RBP14.43□□□□□ -0.1
TPM3-204ENST00000323144 STOX1Q6ZVD7 989 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 ZNF365Q70YC5 407 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.43□□□□□ -0.1
TPM3-204ENST00000323144 TMEM199Q8N511 208 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 DNERQ8NFT8 737 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 SYTL5Q8TDW5 730 aaPredicted RBP14.43□□□□□ -0.1
TPM3-204ENST00000323144 VWCEQ96DN2 955 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 SCLYQ96I15 445 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 KRT23Q9C075 422 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 ALDH8A1Q9H2A2 487 aaPredicted RBP14.43□□□□□ -0.1
TPM3-204ENST00000323144 CNNM2Q9H8M5 875 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 IL23AQ9NPF7 189 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 BAZ2BQ9UIF8 2168 aaKnown RBP14.42□□□□□ -0.1
TPM3-204ENST00000323144 CYP21A2P08686 494 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 CYP2C9P11712 490 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 CPT1AP50416 773 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 SCFD2Q8WU76 684 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 TIFAQ96CG3 184 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 TAAR1Q96RJ0 339 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 PBX4Q9BYU1 374 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 POLR3EQ9NVU0 708 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 CTNNA3Q9UI47 895 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 PNMA2Q9UL42 364 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 SIP14410 1827 aa14.42□□□□□ -0.1
TPM3-204ENST00000323144 REV3LO60673 3130 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 TMEM265A0A087WTH1 108 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 EIF2AK2P19525 551 aaKnown RBP14.41□□□□□ -0.1
TPM3-204ENST00000323144 CHMLP26374 656 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 NT5C2P49902 561 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 GRIN2CQ14957 1233 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 CCDC178Q5BJE1 867 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 FAM47CQ5HY64 1035 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 FBXO11Q86XK2 927 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 USP38Q8NB14 1042 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 MTG1Q9BT17 334 aaPredicted RBP14.41□□□□□ -0.1
TPM3-204ENST00000323144 VAT1LQ9HCJ6 419 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 MAD2L2Q9UI95 211 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 TRIP12Q14669 1992 aaPredicted RBP14.41□□□□□ -0.1
TPM3-204ENST00000323144 TET1Q8NFU7 2136 aa14.41□□□□□ -0.1
TPM3-204ENST00000323144 MMP3P08254 477 aa14.4□□□□□ -0.1
TPM3-204ENST00000323144 TXNP10599 105 aaKnown RBP14.4□□□□□ -0.1
TPM3-204ENST00000323144 ANTXR2P58335 489 aa14.4□□□□□ -0.1
TPM3-204ENST00000323144 ARHGAP1Q07960 439 aa14.4□□□□□ -0.1
TPM3-204ENST00000323144 COL9A3Q14050 684 aaPredicted RBP14.4□□□□□ -0.1
TPM3-204ENST00000323144 CCDC62Q6P9F0 684 aa14.4□□□□□ -0.1
TPM3-204ENST00000323144 OTOP2Q7RTS6 562 aa14.4□□□□□ -0.1
TPM3-204ENST00000323144 HOMER1Q86YM7 354 aa14.4□□□□□ -0.1
TPM3-204ENST00000323144 IL31RAQ8NI17 732 aa14.4□□□□□ -0.1
TPM3-204ENST00000323144 YBX2Q9Y2T7 364 aaKnown RBP14.4□□□□□ -0.1
TPM3-204ENST00000323144 A0A0C4DFX4 3053 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 SPTBN5Q9NRC6 3674 aaKnown RBP14.39□□□□□ -0.11
TPM3-204ENST00000323144 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.39□□□□□ -0.11
TPM3-204ENST00000323144 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.39□□□□□ -0.11
TPM3-204ENST00000323144 A6NJR5 290 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 NKRFO15226 690 aaKnown RBP eCLIP14.39□□□□□ -0.11
TPM3-204ENST00000323144 SGSM2O43147 1006 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 CFBP00751 764 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 TTLL4Q14679 1199 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 GRM4Q14833 912 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 LY6KQ17RY6 165 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 NBPF20Q3BBV1 942 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 SEPT14Q6ZU15 432 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 CHST3Q7LGC8 479 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 SKAP1Q86WV1 359 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 RGS22Q8NE09 1264 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 AFG1LQ8WV93 481 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 HERVK_113Q902F9 699 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 MTMR8Q96EF0 704 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 RMDN3Q96TC7 470 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 MPHOSPH6Q99547 160 aaKnown RBP14.39□□□□□ -0.11
TPM3-204ENST00000323144 PXMP2Q9NR77 195 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 CUL9Q8IWT3 2517 aa14.39□□□□□ -0.11
TPM3-204ENST00000323144 KLRF2D3W0D1 207 aa14.38□□□□□ -0.11
TPM3-204ENST00000323144 E7EWF7 191 aa14.38□□□□□ -0.11
TPM3-204ENST00000323144 SORBS3O60504 671 aa14.38□□□□□ -0.11
TPM3-204ENST00000323144 ZNF286BP0CG31 522 aa14.38□□□□□ -0.11
TPM3-204ENST00000323144 HOXA13P31271 388 aaPredicted RBP14.38□□□□□ -0.11
TPM3-204ENST00000323144 HSD17B4P51659 736 aa14.38□□□□□ -0.11
TPM3-204ENST00000323144 CHMP4BP1P59074 171 aa14.38□□□□□ -0.11
TPM3-204ENST00000323144 CTAGE1Q96RT6 745 aa14.38□□□□□ -0.11
TPM3-204ENST00000323144 COL25A1Q9BXS0 654 aaPredicted RBP14.38□□□□□ -0.11
TPM3-204ENST00000323144 NKX2-4Q9H2Z4 354 aa14.38□□□□□ -0.11
TPM3-204ENST00000323144 ZNF576Q9H609 170 aa14.38□□□□□ -0.11
TPM3-204ENST00000323144 MRPL11Q9Y3B7 192 aaKnown RBP14.38□□□□□ -0.11
TPM3-204ENST00000323144 VCANP13611 3396 aa14.38□□□□□ -0.11
TPM3-204ENST00000323144 MICAL3Q7RTP6 2002 aa14.37□□□□□ -0.11
TPM3-204ENST00000323144 PALM3A6NDB9 673 aaPredicted RBP14.37□□□□□ -0.11
TPM3-204ENST00000323144 CYTH3O43739 400 aa14.37□□□□□ -0.11
TPM3-204ENST00000323144 RABGGTBP53611 331 aa14.37□□□□□ -0.11
TPM3-204ENST00000323144 GHRHRQ02643 423 aa14.37□□□□□ -0.11
TPM3-204ENST00000323144 ARHGEF16Q5VV41 709 aa14.37□□□□□ -0.11
TPM3-204ENST00000323144 DEFB128Q7Z7B8 93 aa14.37□□□□□ -0.11
TPM3-204ENST00000323144 RALYLQ86SE5 291 aaKnown RBP14.37□□□□□ -0.11
TPM3-204ENST00000323144 MB21D2Q8IYB1 491 aaPredicted RBP14.37□□□□□ -0.11
TPM3-204ENST00000323144 NSUN6Q8TEA1 469 aaKnown RBP14.37□□□□□ -0.11
TPM3-204ENST00000323144 PIGSQ96S52 555 aa14.37□□□□□ -0.11
TPM3-204ENST00000323144 MYL10Q9BUA6 226 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms