RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SPECC1L-ADORA2AF8WAN1 911 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 ESCO1Q5FWF5 840 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 SPATA21Q7Z572 469 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 TUBGCP2Q9BSJ2 902 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 L2HGDHQ9H9P8 463 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 MAN1B1Q9UKM7 699 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 SH3TC1Q8TE82 1336 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 ANO9A1A5B4 782 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 ATF2P15336 505 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 EIF4A2Q14240 407 aaKnown RBP7.68□□□□□ -1.18
SMC1A-201ENST00000322213 CALCRLQ16602 461 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 CRACR2BQ8N4Y2 399 aaPredicted RBP7.68□□□□□ -1.18
SMC1A-201ENST00000322213 ZNF653Q96CK0 615 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 LZTS2Q9BRK4 669 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 CLTCQ00610 1675 aaKnown RBP7.68□□□□□ -1.18
SMC1A-201ENST00000322213 GSTA2P09210 222 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 ATF3P18847 181 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 USP14P54578 494 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 GSTO1P78417 241 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 KDM4CQ9H3R0 1056 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 ZC4H2Q9NQZ6 224 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 SPAG7O75391 227 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 FAM107AO95990 144 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 TCP11X2Q5H9J9 407 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 HAUS3Q68CZ6 603 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 ICA1LQ8NDH6 482 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 G3BP2Q9UN86 482 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 STX8Q9UNK0 236 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 NUB1Q9Y5A7 615 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 PLCH2O75038 1416 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 GJC1P36383 396 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 MAGOHP61326 146 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 MAGOHBQ96A72 148 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 DHTKD1Q96HY7 919 aaPredicted RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 MOV10L1Q9BXT6 1211 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 SNRKQ9NRH2 765 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 ZFYVE16Q7Z3T8 1539 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 SYNGAP1Q96PV0 1343 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 B4DLN1 442 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 MSH2P43246 934 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 PHEXP78562 749 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 E4F1Q66K89 784 aaPredicted RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 GDAP1Q8TB36 358 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 NLRP7Q8WX94 980 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 SYMPKQ92797 1274 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 PCDHA13Q9Y5I0 950 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 RGPD2P0DJD1 1756 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 CHL1O00533 1208 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 SNRPA1P09661 255 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 TNFAIP3P21580 790 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 ADCY8P40145 1251 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 KPNB1Q14974 876 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 ENOX1Q8TC92 643 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 PLEKHF1Q96S99 279 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 GPAA1O43292 621 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 ANKRD35Q8N283 1001 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 PAF1Q8N7H5 531 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 EIF2AQ9BY44 585 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 INTUQ9ULD6 942 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 PARP3Q9Y6F1 533 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 PECAM1P16284 738 aaPredicted RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 DR1Q01658 176 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 RESTQ13127 1097 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 LMO7Q8WWI1 1683 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 PIKFYVEQ9Y2I7 2098 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 WAPLQ7Z5K2 1190 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 SSH3Q8TE77 659 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 CNOT6LQ96LI5 555 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 TAF1DQ9H5J8 278 aaPredicted RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 LRRIQ3A6PVS8 624 aaPredicted RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 GYG2O15488 501 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 ATP5JP18859 108 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 DIS3L2Q8IYB7 885 aaKnown RBP7.67□□□□□ -1.18
SMC1A-201ENST00000322213 BLZF1Q9H2G9 400 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 ANKIB1Q9P2G1 1089 aa7.67□□□□□ -1.18
SMC1A-201ENST00000322213 LAD1O00515 517 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 STK10O94804 968 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 PDE6BP35913 854 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 ARHGAP4P98171 946 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 ARHGAP22Q7Z5H3 698 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 LZICQ8WZA0 190 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 HAUS8Q9BT25 410 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 THAP9Q9H5L6 903 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 PTPN22Q9Y2R2 807 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 CNGA1P29973 690 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 RAD23BP54727 409 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 PIK3AP1Q6ZUJ8 805 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 SGSM3Q96HU1 749 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 VPS37BQ9H9H4 285 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 RIC8AQ9NPQ8 531 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 PAPOLBQ9NRJ5 636 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 MYLKQ15746 1914 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 MAGEB6P1A0A0J9YX57 407 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 HSPA6P17066 643 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 STAT1P42224 750 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 ADCK5Q3MIX3 580 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 TGS1Q96RS0 853 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 NAP1L4Q99733 375 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms