RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 FAM47AQ5JRC9 791 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 NLRP14Q86W24 1093 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 CENPHQ9H3R5 247 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 LRRC53A6NM62 1247 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 PPARDQ03181 441 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 GFPT1Q06210 699 aaPredicted RBP19.8■□□□□ 0.76
PRKCB-202ENST00000321728 DDR1Q08345 913 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 MAATS1Q7Z4T9 603 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 LRRC15Q8TF66 581 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 MTMR8Q96EF0 704 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 CARD10Q9BWT7 1032 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 GDF3Q9NR23 364 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 TOGARAM1Q9Y4F4 1720 aa19.8■□□□□ 0.76
PRKCB-202ENST00000321728 E7EVH7 732 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 KLHDC7AQ5VTJ3 777 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 YTHDF3Q7Z739 585 aaKnown RBP19.79■□□□□ 0.76
PRKCB-202ENST00000321728 MYCBPAPQ8TBZ2 947 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 HPS3Q969F9 1004 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 PLCG1P19174 1290 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 HPDP32754 393 aaPredicted RBP19.79■□□□□ 0.76
PRKCB-202ENST00000321728 MDH1P40925 334 aaKnown RBP19.79■□□□□ 0.76
PRKCB-202ENST00000321728 VWA3BQ502W6 1294 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 IQCDQ96DY2 449 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 ATP6V1G3Q96LB4 118 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 PCDHA4Q9UN74 947 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 LCA5LO95447 670 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 CYP19A1P11511 503 aaPredicted RBP19.79■□□□□ 0.76
PRKCB-202ENST00000321728 ERCC3P19447 782 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 INF2Q27J81 1249 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 SUSD4Q5VX71 490 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 KRT12Q99456 494 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 TRIM9Q9C026 710 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 CCSER1Q9C0I3 900 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 NDST4Q9H3R1 872 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 KLC4Q9NSK0 619 aa19.79■□□□□ 0.76
PRKCB-202ENST00000321728 USP17L12C9JPN9 530 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 USP17L21D6R901 530 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 RNASE9P60153 205 aaKnown RBP19.78■□□□□ 0.76
PRKCB-202ENST00000321728 ATP2B2Q01814 1243 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 CCDC40Q4G0X9 1142 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 GIMAP7Q8NHV1 300 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 PIK3R5Q8WYR1 880 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 VCPKMTQ9H867 229 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 PPANQ9NQ55 473 aaKnown RBP19.78■□□□□ 0.76
PRKCB-202ENST00000321728 PAPPAQ13219 1627 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 DUOX1Q9NRD9 1551 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 BAZ2AQ9UIF9 1905 aaKnown RBP19.78■□□□□ 0.76
PRKCB-202ENST00000321728 CHUKO15111 745 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 SLC1A4P43007 532 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 ACTN3Q08043 901 aaPredicted RBP19.78■□□□□ 0.76
PRKCB-202ENST00000321728 SEMA3FQ13275 785 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 TDRD12Q587J7 1177 aaKnown RBP19.78■□□□□ 0.76
PRKCB-202ENST00000321728 CEP85LQ5SZL2 805 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 TMC4Q7Z404 712 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 CCDC13Q8IYE1 715 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 CCDC155Q8N6L0 562 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 RIOK1Q9BRS2 568 aaKnown RBP19.78■□□□□ 0.76
PRKCB-202ENST00000321728 SIK3Q9Y2K2 1263 aa19.78■□□□□ 0.76
PRKCB-202ENST00000321728 CACNA2D4Q7Z3S7 1137 aa19.77■□□□□ 0.76
PRKCB-202ENST00000321728 CABP7Q86V35 215 aa19.77■□□□□ 0.76
PRKCB-202ENST00000321728 ZKSCAN4Q969J2 545 aaPredicted RBP19.77■□□□□ 0.76
PRKCB-202ENST00000321728 PAGR1Q9BTK6 254 aa19.77■□□□□ 0.76
PRKCB-202ENST00000321728 A1CFQ9NQ94 594 aaKnown RBP19.77■□□□□ 0.76
PRKCB-202ENST00000321728 TCP11L1Q9NUJ3 509 aa19.77■□□□□ 0.76
PRKCB-202ENST00000321728 TSKSQ9UJT2 592 aa19.77■□□□□ 0.76
PRKCB-202ENST00000321728 GOLGA6L10A6NI86 522 aa19.77■□□□□ 0.75
PRKCB-202ENST00000321728 GYG1P46976 350 aa19.77■□□□□ 0.75
PRKCB-202ENST00000321728 CDR1P51861 262 aa19.77■□□□□ 0.75
PRKCB-202ENST00000321728 CASKIN2Q8WXE0 1202 aa19.77■□□□□ 0.75
PRKCB-202ENST00000321728 SLC39A2Q9NP94 309 aa19.77■□□□□ 0.75
PRKCB-202ENST00000321728 MTMR7Q9Y216 660 aa19.77■□□□□ 0.75
PRKCB-202ENST00000321728 HMGB1P1B2RPK0 211 aaPredicted RBP19.76■□□□□ 0.75
PRKCB-202ENST00000321728 FAM107AO95990 144 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 TRADDQ15628 312 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 CCDC84Q86UT8 332 aaPredicted RBP19.76■□□□□ 0.75
PRKCB-202ENST00000321728 SEMA6BQ9H3T3 888 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 JAG2Q9Y219 1238 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 PLAAQ9Y263 795 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 ARAP2Q8WZ64 1704 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 PJA2O43164 708 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 FTCDO95954 541 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 IBSPP21815 317 aaPredicted RBP19.76■□□□□ 0.75
PRKCB-202ENST00000321728 KIF5BP33176 963 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 SMTNP53814 917 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 CD302Q8IX05 232 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 RNF14Q9UBS8 474 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 PLCH1Q4KWH8 1693 aa19.76■□□□□ 0.75
PRKCB-202ENST00000321728 MREGQ8N565 214 aa19.75■□□□□ 0.75
PRKCB-202ENST00000321728 BRIP1Q9BX63 1249 aa19.75■□□□□ 0.75
PRKCB-202ENST00000321728 SHANK3Q9BYB0 1731 aa19.75■□□□□ 0.75
PRKCB-202ENST00000321728 PALMO75781 387 aa19.75■□□□□ 0.75
PRKCB-202ENST00000321728 ITGB3BPQ13352 177 aaPredicted RBP19.75■□□□□ 0.75
PRKCB-202ENST00000321728 TXNRD1Q16881 649 aa19.75■□□□□ 0.75
PRKCB-202ENST00000321728 EMC10Q5UCC4 262 aa19.75■□□□□ 0.75
PRKCB-202ENST00000321728 CNNM4Q6P4Q7 775 aa19.75■□□□□ 0.75
PRKCB-202ENST00000321728 CCDC121Q6ZUS5 278 aa19.75■□□□□ 0.75
PRKCB-202ENST00000321728 RNF10Q8N5U6 811 aaKnown RBP19.75■□□□□ 0.75
PRKCB-202ENST00000321728 WHAMMQ8TF30 809 aa19.75■□□□□ 0.75
PRKCB-202ENST00000321728 CCDC114Q96M63 670 aa19.75■□□□□ 0.75
PRKCB-202ENST00000321728 CUEDC2Q9H467 287 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms