RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 DGKHQ86XP1 1220 aa16.7■□□□□ 0.26
RPP40-201ENST00000319533 TBC1D10CQ8IV04 446 aa16.7■□□□□ 0.26
RPP40-201ENST00000319533 MPHOSPH6Q99547 160 aaKnown RBP16.7■□□□□ 0.26
RPP40-201ENST00000319533 RNF41Q9H4P4 317 aaPredicted RBP16.7■□□□□ 0.26
RPP40-201ENST00000319533 TNFRSF10AO00220 468 aa16.69■□□□□ 0.26
RPP40-201ENST00000319533 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
RPP40-201ENST00000319533 RFC2P35250 354 aa16.69■□□□□ 0.26
RPP40-201ENST00000319533 RABGGTBP53611 331 aa16.69■□□□□ 0.26
RPP40-201ENST00000319533 TTLL4Q14679 1199 aa16.69■□□□□ 0.26
RPP40-201ENST00000319533 PPP2R5BQ15173 497 aa16.69■□□□□ 0.26
RPP40-201ENST00000319533 ANKS1AQ92625 1134 aa16.69■□□□□ 0.26
RPP40-201ENST00000319533 ASB2Q96Q27 587 aa16.69■□□□□ 0.26
RPP40-201ENST00000319533 GPHNQ9NQX3 736 aaPredicted RBP16.69■□□□□ 0.26
RPP40-201ENST00000319533 THEGQ9P2T0 379 aa16.69■□□□□ 0.26
RPP40-201ENST00000319533 RAD50Q92878 1312 aa16.69■□□□□ 0.26
RPP40-201ENST00000319533 B4DLN1 442 aa16.68■□□□□ 0.26
RPP40-201ENST00000319533 ATP2A2P16615 1042 aaKnown RBP16.68■□□□□ 0.26
RPP40-201ENST00000319533 MRPL12P52815 198 aaKnown RBP16.68■□□□□ 0.26
RPP40-201ENST00000319533 MFAP1P55081 439 aaKnown RBP16.68■□□□□ 0.26
RPP40-201ENST00000319533 CCDC62Q6P9F0 684 aa16.68■□□□□ 0.26
RPP40-201ENST00000319533 PPM1EQ8WY54 764 aa16.68■□□□□ 0.26
RPP40-201ENST00000319533 ESR2Q92731 530 aa16.68■□□□□ 0.26
RPP40-201ENST00000319533 SUPT16HQ9Y5B9 1047 aaKnown RBP16.68■□□□□ 0.26
RPP40-201ENST00000319533 NCOR1O75376 2440 aa16.67■□□□□ 0.26
RPP40-201ENST00000319533 ARIH2O95376 493 aa16.67■□□□□ 0.26
RPP40-201ENST00000319533 TXNP10599 105 aaKnown RBP16.67■□□□□ 0.26
RPP40-201ENST00000319533 MYOGP15173 224 aa16.67■□□□□ 0.26
RPP40-201ENST00000319533 SDSP20132 328 aa16.67■□□□□ 0.26
RPP40-201ENST00000319533 POU3F3P20264 500 aaPredicted RBP16.67■□□□□ 0.26
RPP40-201ENST00000319533 MRPS5P82675 430 aaKnown RBP16.67■□□□□ 0.26
RPP40-201ENST00000319533 CCDC178Q5BJE1 867 aa16.67■□□□□ 0.26
RPP40-201ENST00000319533 PPP2R2DQ66LE6 453 aa16.67■□□□□ 0.26
RPP40-201ENST00000319533 SMC5Q8IY18 1101 aa16.67■□□□□ 0.26
RPP40-201ENST00000319533 COPS5Q92905 334 aa16.67■□□□□ 0.26
RPP40-201ENST00000319533 OSBPL3Q9H4L5 887 aa16.67■□□□□ 0.26
RPP40-201ENST00000319533 NEDD4P46934 1319 aa16.67■□□□□ 0.26
RPP40-201ENST00000319533 TRANK1O15050 2925 aa16.66■□□□□ 0.26
RPP40-201ENST00000319533 ZBBXA8MT70 800 aa16.66■□□□□ 0.26
RPP40-201ENST00000319533 TRIM6-TRIM34B2RNG4 842 aa16.66■□□□□ 0.26
RPP40-201ENST00000319533 IQCF3P0C7M6 154 aa16.66■□□□□ 0.26
RPP40-201ENST00000319533 GOLGA8HP0CJ92 632 aa16.66■□□□□ 0.26
RPP40-201ENST00000319533 IGFBP4P22692 258 aa16.66■□□□□ 0.26
RPP40-201ENST00000319533 SCN5AQ14524 2016 aa16.66■□□□□ 0.26
RPP40-201ENST00000319533 PHOSPHO2Q8TCD6 241 aa16.66■□□□□ 0.26
RPP40-201ENST00000319533 LNPKQ9C0E8 428 aa16.66■□□□□ 0.26
RPP40-201ENST00000319533 ABCB11O95342 1321 aa16.66■□□□□ 0.26
RPP40-201ENST00000319533 ZNF213O14771 459 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 ACTN1P12814 892 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 CCDC85BQ15834 202 aaPredicted RBP16.65■□□□□ 0.26
RPP40-201ENST00000319533 CDC37Q16543 378 aaPredicted RBP16.65■□□□□ 0.26
RPP40-201ENST00000319533 FAM47CQ5HY64 1035 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 TMEM67Q5HYA8 995 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 DEFB128Q7Z7B8 93 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 SESTD1Q86VW0 696 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 PNMA1Q8ND90 353 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 SYTL5Q8TDW5 730 aaPredicted RBP16.65■□□□□ 0.26
RPP40-201ENST00000319533 TBC1D5Q92609 795 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 RILPL2Q969X0 211 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 CTAGE1Q96RT6 745 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 SLC9A7Q96T83 725 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 ZKSCAN3Q9BRR0 538 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 UBA5Q9GZZ9 404 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 RWDD1Q9H446 243 aaPredicted RBP16.65■□□□□ 0.26
RPP40-201ENST00000319533 LAMA4Q16363 1823 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 TANC1Q9C0D5 1861 aa16.65■□□□□ 0.26
RPP40-201ENST00000319533 BDP1A6H8Y1 2624 aa16.64■□□□□ 0.25
RPP40-201ENST00000319533 BFSP2Q13515 415 aa16.64■□□□□ 0.25
RPP40-201ENST00000319533 USH1GQ495M9 461 aa16.64■□□□□ 0.25
RPP40-201ENST00000319533 IQCA1Q86XH1 822 aa16.64■□□□□ 0.25
RPP40-201ENST00000319533 PLEKHM2Q8IWE5 1019 aa16.64■□□□□ 0.25
RPP40-201ENST00000319533 ADGRF4Q8IZF3 695 aa16.64■□□□□ 0.25
RPP40-201ENST00000319533 RETREG2Q8NC44 543 aa16.64■□□□□ 0.25
RPP40-201ENST00000319533 NSUN6Q8TEA1 469 aaKnown RBP16.64■□□□□ 0.25
RPP40-201ENST00000319533 IWS1Q96ST2 819 aa16.64■□□□□ 0.25
RPP40-201ENST00000319533 CPVLQ9H3G5 476 aa16.64■□□□□ 0.25
RPP40-201ENST00000319533 COL20A1Q9P218 1284 aa16.64■□□□□ 0.25
RPP40-201ENST00000319533 REV3LO60673 3130 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 KDM4AO75164 1064 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 CA3P07451 260 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 MMP3P08254 477 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 ARHGAP1Q07960 439 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 RBL2Q08999 1139 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 MCF2L2Q86YR7 1114 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 ADAMTS19Q8TE59 1207 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 AFG1LQ8WV93 481 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 KAT2BQ92831 832 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 TAAR1Q96RJ0 339 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 ZSCAN10Q96SZ4 725 aaPredicted RBP16.63■□□□□ 0.25
RPP40-201ENST00000319533 KAT14Q9H8E8 782 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 XIRP2A4UGR9 3374 aa16.63■□□□□ 0.25
RPP40-201ENST00000319533 BAIAP3O94812 1187 aa16.62■□□□□ 0.25
RPP40-201ENST00000319533 GH1P01241 217 aa16.62■□□□□ 0.25
RPP40-201ENST00000319533 GHRHRQ02643 423 aa16.62■□□□□ 0.25
RPP40-201ENST00000319533 STXBP2Q15833 593 aa16.62■□□□□ 0.25
RPP40-201ENST00000319533 PTGISQ16647 500 aa16.62■□□□□ 0.25
RPP40-201ENST00000319533 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
RPP40-201ENST00000319533 HERC6Q8IVU3 1022 aa16.62■□□□□ 0.25
RPP40-201ENST00000319533 ENAHQ8N8S7 591 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms