RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 CYP19A1P11511 503 aaPredicted RBP10.67□□□□□ -0.7
RPGR-201ENST00000318842 CYLC1P35663 651 aaPredicted RBP10.67□□□□□ -0.7
RPGR-201ENST00000318842 MAGEA1P43355 309 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 ALX1Q15699 326 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 USP17L2Q6R6M4 530 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 PIK3R5Q8WYR1 880 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 IL17RBQ9NRM6 502 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.67□□□□□ -0.72e-6■■■□□ 17.4
RPGR-201ENST00000318842 NIP7Q9Y221 180 aaKnown RBP eCLIP10.67□□□□□ -0.7
RPGR-201ENST00000318842 SHTN1A0MZ66 631 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 H7C1D1 291 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 PSEN1P49768 467 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 VAV2P52735 878 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 PPFIA1Q13136 1202 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 MCTP2Q6DN12 878 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 RCSD1Q6JBY9 416 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 OTUD6BQ8N6M0 293 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 SCLT1Q96NL6 688 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 SH2D4AQ9H788 454 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 STIM2Q9P246 746 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 TMEM94Q12767 1356 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 NUP188Q5SRE5 1749 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 RPSAP08865 295 aaKnown RBP10.67□□□□□ -0.7
RPGR-201ENST00000318842 KLRC1P26715 233 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 LSP1P33241 339 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 MECOMQ03112 1051 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 CABP7Q86V35 215 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
RPGR-201ENST00000318842 P2RX5Q93086 422 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 CELF4Q9BZC1 486 aaKnown RBP10.67□□□□□ -0.7
RPGR-201ENST00000318842 ADAMTS1Q9UHI8 967 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 PCDHA6Q9UN73 950 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.67□□□□□ -0.7
RPGR-201ENST00000318842 PCDHA8Q9Y5H6 950 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 FRMPD2Q68DX3 1309 aaPredicted RBP10.66□□□□□ -0.7
RPGR-201ENST00000318842 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 TMCO5BA8MYB1 307 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 HSF2BPO75031 334 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 ITGA4P13612 1032 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 KRT83P78385 493 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 KLHDC7AQ5VTJ3 777 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 ATRNO75882 1429 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 ERVV-2B6SEH9 535 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 RAD51CO43502 376 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 TLR2O60603 784 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 SHOX2O60902 331 aaPredicted RBP10.66□□□□□ -0.7
RPGR-201ENST00000318842 POLR2FP61218 127 aaKnown RBP10.66□□□□□ -0.7
RPGR-201ENST00000318842 FAM133AQ8N9E0 248 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 TBC1D31Q96DN5 1066 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 TRIM9Q9C026 710 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 DDX47Q9H0S4 455 aaKnown RBP10.66□□□□□ -0.7
RPGR-201ENST00000318842 DPH5Q9H2P9 285 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 HAUS2Q9NVX0 235 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 PLAAQ9Y263 795 aa10.66□□□□□ -0.7
RPGR-201ENST00000318842 MYMKA6NI61 221 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 PPP1R12BO60237 982 aaPredicted RBP10.65□□□□□ -0.7
RPGR-201ENST00000318842 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
RPGR-201ENST00000318842 DNM2P50570 870 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 ZBED6P86452 979 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 SF3B2Q13435 895 aaKnown RBP10.65□□□□□ -0.7
RPGR-201ENST00000318842 ECM1Q16610 540 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 CFAP58Q5T655 872 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 CACNA2D4Q7Z3S7 1137 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 TBC1D5Q92609 795 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 RNF41Q9H4P4 317 aaPredicted RBP10.65□□□□□ -0.7
RPGR-201ENST00000318842 DCP1AQ9NPI6 582 aaPredicted RBP10.65□□□□□ -0.7
RPGR-201ENST00000318842 CAMTA1Q9Y6Y1 1673 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 TACC1O75410 805 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 TDP2O95551 362 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 CKAP4Q07065 602 aaKnown RBP10.65□□□□□ -0.7
RPGR-201ENST00000318842 SPAG1Q07617 926 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 RAPGEF1Q13905 1077 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 MEA1Q16626 185 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 PFKFB3Q16875 520 aaPredicted RBP10.65□□□□□ -0.7
RPGR-201ENST00000318842 GJB7Q6PEY0 223 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 GIMAP8Q8ND71 665 aaPredicted RBP10.65□□□□□ -0.7
RPGR-201ENST00000318842 PNMA1Q8ND90 353 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 ZNF473Q8WTR7 871 aaKnown RBP10.65□□□□□ -0.7
RPGR-201ENST00000318842 COA7Q96BR5 231 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 MTFR1LQ9H019 292 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 NDST4Q9H3R1 872 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 MYO1AQ9UBC5 1043 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 CNOT8Q9UFF9 292 aaKnown RBP10.65□□□□□ -0.7
RPGR-201ENST00000318842 WDR17Q8IZU2 1322 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 LRP6O75581 1613 aa10.65□□□□□ -0.7
RPGR-201ENST00000318842 KIF1AQ12756 1690 aa10.65□□□□□ -0.71
RPGR-201ENST00000318842 A0A087X0T9 212 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 SLC37A4O43826 429 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 FAM228BP0C875 321 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 MYBL1P10243 752 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 IGHMBP2P38935 993 aaKnown RBP10.64□□□□□ -0.71
RPGR-201ENST00000318842 NCAPGQ9BPX3 1015 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 MMTAG2Q9BU76 263 aaKnown RBP10.64□□□□□ -0.71
RPGR-201ENST00000318842 PLA2G12BQ9BX93 195 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 VIPAS39Q9H9C1 493 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 RTL9Q8NET4 1388 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 KCNK3O14649 394 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 SEMA3EO15041 775 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 NR1D1P20393 614 aa10.64□□□□□ -0.71
RPGR-201ENST00000318842 ERFEQ4G0M1 354 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms