RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 PUF60Q9UHX1 559 aaKnown RBP17.84■□□□□ 0.45
USH1C-202ENST00000318024 N4BP1O75113 896 aaKnown RBP17.83■□□□□ 0.45
USH1C-202ENST00000318024 CD44P16070 742 aaKnown RBP17.83■□□□□ 0.45
USH1C-202ENST00000318024 LMNB1P20700 586 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 KRT2P35908 639 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 SLC16A2P36021 539 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 SPATA1Q5VX52 437 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 KANK3Q6NY19 840 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 TMEM179Q6ZVK1 233 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 IGSF22Q8N9C0 903 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 IPO4Q8TEX9 1081 aaKnown RBP17.83■□□□□ 0.45
USH1C-202ENST00000318024 PIGSQ96S52 555 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 RASSF4Q9H2L5 321 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 SUGCTQ9HAC7 445 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 PCDHB6Q9Y5E3 794 aa17.83■□□□□ 0.45
USH1C-202ENST00000318024 KIF5CO60282 957 aa17.83■□□□□ 0.44
USH1C-202ENST00000318024 RILPL1Q5EBL4 403 aa17.83■□□□□ 0.44
USH1C-202ENST00000318024 WWC2Q6AWC2 1192 aa17.83■□□□□ 0.44
USH1C-202ENST00000318024 HERC5Q9UII4 1024 aaKnown RBP17.83■□□□□ 0.44
USH1C-202ENST00000318024 MYH8P13535 1937 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 TFRCP02786 760 aaKnown RBP17.82■□□□□ 0.44
USH1C-202ENST00000318024 YBX3P16989 372 aaKnown RBP eCLIP17.82■□□□□ 0.44
USH1C-202ENST00000318024 VSNL1P62760 191 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 CCDC96Q2M329 555 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 FKBP1CQ5VVH2 108 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 FAM83AQ86UY5 434 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 LZTS2Q9BRK4 669 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 ITIH6Q6UXX5 1313 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 A0A087X0B3 334 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 ABL1P00519 1130 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 GYPCP04921 128 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 SNHG28P0DPA3 235 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 ARHGAP25P42331 645 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 MCM6Q14566 821 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 ZNF569Q5MCW4 686 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 SLC35F6Q8N357 371 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 SPZ1Q9BXG8 430 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 VPS18Q9P253 973 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 HACL1Q9UJ83 578 aa17.82■□□□□ 0.44
USH1C-202ENST00000318024 RRP15Q9Y3B9 282 aaKnown RBP17.82■□□□□ 0.44
USH1C-202ENST00000318024 AMPD2Q01433 879 aa17.81■□□□□ 0.44
USH1C-202ENST00000318024 ZNF543Q08ER8 600 aa17.81■□□□□ 0.44
USH1C-202ENST00000318024 KIF4BQ2VIQ3 1234 aa17.81■□□□□ 0.44
USH1C-202ENST00000318024 RASGRP4Q8TDF6 673 aa17.81■□□□□ 0.44
USH1C-202ENST00000318024 RRP36Q96EU6 259 aaKnown RBP17.81■□□□□ 0.44
USH1C-202ENST00000318024 NYAP2Q9P242 653 aa17.81■□□□□ 0.44
USH1C-202ENST00000318024 PGAP2Q9UHJ9 254 aa17.81■□□□□ 0.44
USH1C-202ENST00000318024 MYH6P13533 1939 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 FXR1P51114 621 aaKnown RBP eCLIP17.8■□□□□ 0.44
USH1C-202ENST00000318024 PRAMEF18Q5VWM3 479 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 CCDC51Q96ER9 411 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 NUP88Q99567 741 aaPredicted RBP17.8■□□□□ 0.44
USH1C-202ENST00000318024 CSRNP2Q9H175 543 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 BRMS1Q9HCU9 246 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 FAN1Q9Y2M0 1017 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 A0A1W2PRG0 241 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 ECE1P42892 770 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 SLC1A4P43007 532 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 ERVK-24P63145 666 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 CASP8Q14790 479 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 ASPRV1Q53RT3 343 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 SLFN13Q68D06 897 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 CCDC84Q86UT8 332 aaPredicted RBP17.8■□□□□ 0.44
USH1C-202ENST00000318024 SPICE1Q8N0Z3 855 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 TRPM4Q8TD43 1214 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 MKL1Q969V6 931 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 BARHL2Q9NY43 387 aa17.8■□□□□ 0.44
USH1C-202ENST00000318024 SEC63Q9UGP8 760 aaKnown RBP17.8■□□□□ 0.44
USH1C-202ENST00000318024 CTAGE9A4FU28 777 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 PPP1R3GB7ZBB8 358 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 F5H6K3 240 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 H7C1D1 291 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 STXBP3O00186 592 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 WNT7AO00755 349 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 ERLIN1O75477 346 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 CASP14P31944 242 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 EPS15P42566 896 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 NOP2P46087 812 aaKnown RBP17.79■□□□□ 0.44
USH1C-202ENST00000318024 TNNI2P48788 182 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 KLRC3Q07444 240 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 WHAMMP3Q1A5X7 153 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 PIK3AP1Q6ZUJ8 805 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 PPFIBP1Q86W92 1011 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 ADGRF4Q8IZF3 695 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 RIOX1Q9H6W3 641 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 COL2A1P02458 1487 aaPredicted RBP17.79■□□□□ 0.44
USH1C-202ENST00000318024 LRRC10BA6NIK2 292 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 DDNO94850 711 aaPredicted RBP17.79■□□□□ 0.44
USH1C-202ENST00000318024 IVLP07476 585 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 WDR93Q6P2C0 686 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 C10orf67Q8IYJ2 551 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 ACRBPQ8NEB7 543 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 ACER1Q8TDN7 264 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 DEFB129Q9H1M3 183 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 RNF181Q9P0P0 153 aa17.79■□□□□ 0.44
USH1C-202ENST00000318024 ARFGEF1Q9Y6D6 1849 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 SYNRGQ9UMZ2 1314 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 NAPAP54920 295 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 DPYDQ12882 1025 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 FOXR1Q6PIV2 292 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms