RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ADCY7P51828 1080 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 GYS2P54840 703 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 SNAP25P60880 206 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 MAP3K10Q02779 954 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 POSTNQ15063 836 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 UBE2SQ16763 222 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 REXO1Q8N1G1 1221 aaKnown RBP14.67□□□□□ -0.06
CPNE1-201ENST00000317677 TBCKQ8TEA7 893 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 GMCL1Q96IK5 515 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 L3MBTL3Q96JM7 780 aaPredicted RBP14.67□□□□□ -0.06
CPNE1-201ENST00000317677 TEPSINQ96N21 525 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 DONSONQ9NYP3 566 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 ZBTB21Q9ULJ3 1066 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 KIF1CO43896 1103 aaKnown RBP14.67□□□□□ -0.06
CPNE1-201ENST00000317677 TBC1D12O60347 775 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 MYCNP04198 464 aaPredicted RBP14.67□□□□□ -0.06
CPNE1-201ENST00000317677 TAL1P17542 331 aaPredicted RBP14.67□□□□□ -0.06
CPNE1-201ENST00000317677 CASP1P29466 404 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 CDC25AP30304 524 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 ACTN2P35609 894 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 GMPSP49915 693 aaPredicted RBP14.67□□□□□ -0.06
CPNE1-201ENST00000317677 NCAPHQ15003 741 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 TNIP1Q15025 636 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 NT5DC1Q5TFE4 455 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 PPP1R18Q6NYC8 613 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 REXO1L1PQ8IX06 675 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 BPIFA3Q9BQP9 254 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 SRRTQ9BXP5 876 aaKnown RBP14.67□□□□□ -0.06
CPNE1-201ENST00000317677 DEF6Q9H4E7 631 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 RIC8AQ9NPQ8 531 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 MAN1B1Q9UKM7 699 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.67□□□□□ -0.068e-7■□□□□ 11.3
CPNE1-201ENST00000317677 ZNF541Q9H0D2 1346 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 PP2D1A8MPX8 630 aa14.66□□□□□ -0.06
CPNE1-201ENST00000317677 POTECB2RU33 542 aa14.66□□□□□ -0.06
CPNE1-201ENST00000317677 CCZ1BP86790 482 aa14.66□□□□□ -0.06
CPNE1-201ENST00000317677 CCZ1P86791 482 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-201ENST00000317677 CDC37Q16543 378 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-201ENST00000317677 LETM2Q2VYF4 491 aa14.66□□□□□ -0.06
CPNE1-201ENST00000317677 ARHGAP29Q52LW3 1261 aa14.66□□□□□ -0.06
CPNE1-201ENST00000317677 CCDC91Q7Z6B0 441 aa14.66□□□□□ -0.06
CPNE1-201ENST00000317677 RPAINQ86UA6 219 aa14.66□□□□□ -0.06
CPNE1-201ENST00000317677 GPC2Q8N158 579 aa14.66□□□□□ -0.06
CPNE1-201ENST00000317677 BANK1Q8NDB2 785 aa14.66□□□□□ -0.06
CPNE1-201ENST00000317677 SPATA20Q8TB22 786 aa14.66□□□□□ -0.06
CPNE1-201ENST00000317677 POLR3GO15318 223 aaPredicted RBP14.65□□□□□ -0.06
CPNE1-201ENST00000317677 PDXDC2PQ6P474 469 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 SAMD7Q7Z3H4 446 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 NEK8Q86SG6 692 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 CCDC84Q86UT8 332 aaPredicted RBP14.65□□□□□ -0.06
CPNE1-201ENST00000317677 LRRC15Q8TF66 581 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 PAGE5Q96GU1 130 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 MTRQ99707 1265 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 GLIS2Q9BZE0 524 aaPredicted RBP14.65□□□□□ -0.06
CPNE1-201ENST00000317677 HSD3B7Q9H2F3 369 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 CPP00450 1065 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 BMP3P12645 472 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 RPS12P25398 132 aaKnown RBP14.65□□□□□ -0.06
CPNE1-201ENST00000317677 LONP1P36776 959 aaKnown RBP14.65□□□□□ -0.06
CPNE1-201ENST00000317677 DHX8Q14562 1220 aaKnown RBP14.65□□□□□ -0.06
CPNE1-201ENST00000317677 RASA3Q14644 834 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 CT47A1Q5JQC4 288 aaPredicted RBP14.65□□□□□ -0.06
CPNE1-201ENST00000317677 BTNL9Q6UXG8 535 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 MICALL2Q8IY33 904 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 SPICE1Q8N0Z3 855 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 MNS1Q8NEH6 495 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 P2RX7Q99572 595 aaKnown RBP14.65□□□□□ -0.06
CPNE1-201ENST00000317677 TMX1Q9H3N1 280 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 HACL1Q9UJ83 578 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 TMX2Q9Y320 296 aa14.65□□□□□ -0.06
CPNE1-201ENST00000317677 PHF20L1A8MW92 1017 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 MYO1BO43795 1136 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 CCNT1O60563 726 aaKnown RBP14.64□□□□□ -0.07
CPNE1-201ENST00000317677 CAP2P40123 477 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 SYDE2Q5VT97 1194 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 POTEDQ86YR6 584 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 PPM1EQ8WY54 764 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 CEP89Q96ST8 783 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 GJA3Q9Y6H8 435 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 TMEM232C9JQI7 657 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 SLC37A4O43826 429 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 TDP2O95551 362 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 OAS2P29728 719 aaKnown RBP14.64□□□□□ -0.07
CPNE1-201ENST00000317677 PRPHP41219 470 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 AFMP43652 599 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 GSDMDP57764 484 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 MORC3Q14149 939 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 SMC1AQ14683 1233 aaKnown RBP14.64□□□□□ -0.07
CPNE1-201ENST00000317677 TBC1D10BQ4KMP7 808 aaPredicted RBP14.64□□□□□ -0.07
CPNE1-201ENST00000317677 NAALADL2Q58DX5 795 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 PACS2Q86VP3 889 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 UBXN4Q92575 508 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 STAMQ92783 540 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 SYNPO2Q9UMS6 1093 aa14.64□□□□□ -0.07
CPNE1-201ENST00000317677 BECN2A8MW95 431 aa14.63□□□□□ -0.07
CPNE1-201ENST00000317677 GOLGA6L19H0YKK7 550 aa14.63□□□□□ -0.07
CPNE1-201ENST00000317677 OR52Z1P0C646 297 aa14.63□□□□□ -0.07
CPNE1-201ENST00000317677 LMOD1P29536 600 aaPredicted RBP14.63□□□□□ -0.07
CPNE1-201ENST00000317677 DPYDQ12882 1025 aa14.63□□□□□ -0.07
CPNE1-201ENST00000317677 KARSQ15046 597 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms