RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 TMEM60Q9H2L4 133 aa4□□□□□ -1.77
GEN1-201ENST00000317402 DNAJC17Q9NVM6 304 aaKnown RBP4□□□□□ -1.77
GEN1-201ENST00000317402 SUGT1Q9Y2Z0 365 aa4□□□□□ -1.77
GEN1-201ENST00000317402 KDM3BQ7LBC6 1761 aa4□□□□□ -1.77
GEN1-201ENST00000317402 DEUP1Q05D60 604 aa4□□□□□ -1.77
GEN1-201ENST00000317402 TNIP1Q15025 636 aa4□□□□□ -1.77
GEN1-201ENST00000317402 EGFL6Q8IUX8 553 aa4□□□□□ -1.77
GEN1-201ENST00000317402 FBF1Q8TES7 1133 aa4□□□□□ -1.77
GEN1-201ENST00000317402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4□□□□□ -1.77
GEN1-201ENST00000317402 SLF1Q9BQI6 1058 aa4□□□□□ -1.77
GEN1-201ENST00000317402 CSRNP2Q9H175 543 aa4□□□□□ -1.77
GEN1-201ENST00000317402 ORC3Q9UBD5 711 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 MAGEC2Q9UBF1 373 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 KCNG1Q9UIX4 513 aa4□□□□□ -1.77
GEN1-201ENST00000317402 CTNND2Q9UQB3 1225 aa4□□□□□ -1.77
GEN1-201ENST00000317402 EPB41L3Q9Y2J2 1087 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 REXO2Q9Y3B8 237 aaKnown RBP4□□□□□ -1.77
GEN1-201ENST00000317402 TISP43B9A030 160 aa4□□□□□ -1.77
GEN1-201ENST00000317402 IKBKBO14920 756 aa4□□□□□ -1.77
GEN1-201ENST00000317402 CAND2O75155 1236 aa4□□□□□ -1.77
GEN1-201ENST00000317402 LIG3P49916 1009 aa4□□□□□ -1.77
GEN1-201ENST00000317402 SPATS2Q86XZ4 545 aaKnown RBP4□□□□□ -1.77
GEN1-201ENST00000317402 EHBP1Q8NDI1 1231 aa4□□□□□ -1.77
GEN1-201ENST00000317402 ANKRD7Q92527 254 aa4□□□□□ -1.77
GEN1-201ENST00000317402 TRIM11Q96F44 468 aa4□□□□□ -1.77
GEN1-201ENST00000317402 METTL22Q9BUU2 404 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 RAB34Q9BZG1 259 aa4□□□□□ -1.77
GEN1-201ENST00000317402 LUC7L2Q9Y383 392 aaKnown RBP4□□□□□ -1.77
GEN1-201ENST00000317402 RABGAP1Q9Y3P9 1069 aa4□□□□□ -1.77
GEN1-201ENST00000317402 EME2A4GXA9 379 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 PDE2AO00408 941 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 CBFA2T2O43439 604 aa4□□□□□ -1.77
GEN1-201ENST00000317402 FMR1NBQ8N0W7 255 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 ENGASEQ8NFI3 743 aa4□□□□□ -1.77
GEN1-201ENST00000317402 MAN1B1Q9UKM7 699 aa4□□□□□ -1.77
GEN1-201ENST00000317402 ARIH1Q9Y4X5 557 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 MYO9AB2RTY4 2548 aa4□□□□□ -1.77
GEN1-201ENST00000317402 TMEM150BA6NC51 233 aa4□□□□□ -1.77
GEN1-201ENST00000317402 MYO1CO00159 1063 aa4□□□□□ -1.77
GEN1-201ENST00000317402 TUBBP07437 444 aa4□□□□□ -1.77
GEN1-201ENST00000317402 MECOMQ03112 1051 aa4□□□□□ -1.77
GEN1-201ENST00000317402 ECM1Q16610 540 aa4□□□□□ -1.77
GEN1-201ENST00000317402 DYMQ7RTS9 669 aa4□□□□□ -1.77
GEN1-201ENST00000317402 SDCCAG8Q86SQ7 713 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 TMEM139Q8IV31 216 aa4□□□□□ -1.77
GEN1-201ENST00000317402 WASF1Q92558 559 aa4□□□□□ -1.77
GEN1-201ENST00000317402 NUP88Q99567 741 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 PRDM16Q9HAZ2 1276 aa4□□□□□ -1.77
GEN1-201ENST00000317402 UTP6Q9NYH9 597 aaKnown RBP4□□□□□ -1.77
GEN1-201ENST00000317402 TBX22Q9Y458 520 aa4□□□□□ -1.77
GEN1-201ENST00000317402 PCDHA5Q9Y5H7 936 aa4□□□□□ -1.77
GEN1-201ENST00000317402 VWA8A3KMH1 1905 aa4□□□□□ -1.77
GEN1-201ENST00000317402 DOCK2Q92608 1830 aa4□□□□□ -1.77
GEN1-201ENST00000317402 ADAMTSL3P82987 1691 aa4□□□□□ -1.77
GEN1-201ENST00000317402 GOLGA6CA6NDK9 693 aa4□□□□□ -1.77
GEN1-201ENST00000317402 GOLGA6BA6NDN3 693 aa4□□□□□ -1.77
GEN1-201ENST00000317402 BUB1O43683 1085 aa4□□□□□ -1.77
GEN1-201ENST00000317402 GOLGA6DP0CG33 693 aa4□□□□□ -1.77
GEN1-201ENST00000317402 ARHGAP29Q52LW3 1261 aa4□□□□□ -1.77
GEN1-201ENST00000317402 GKAP1Q5VSY0 366 aaPredicted RBP4□□□□□ -1.77
GEN1-201ENST00000317402 GNL3Q9BVP2 549 aaKnown RBP eCLIP4□□□□□ -1.77
GEN1-201ENST00000317402 GOLGA6AQ9NYA3 693 aa4□□□□□ -1.77
GEN1-201ENST00000317402 RFC1P35251 1148 aaPredicted RBP3.99□□□□□ -1.77
GEN1-201ENST00000317402 CCDC6Q16204 474 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 CEP85LQ5SZL2 805 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 PNMA1Q8ND90 353 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 AGPAT5Q9NUQ2 364 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 STAP2Q9UGK3 403 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 CAPN7Q9Y6W3 813 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 SIPA1L3O60292 1781 aaPredicted RBP3.99□□□□□ -1.77
GEN1-201ENST00000317402 FRMPD3Q5JV73 1810 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 ZRANB2O95218 330 aaKnown RBP eCLIP3.99□□□□□ -1.77
GEN1-201ENST00000317402 SLU7O95391 586 aaKnown RBP3.99□□□□□ -1.77
GEN1-201ENST00000317402 OAS2P29728 719 aaKnown RBP3.99□□□□□ -1.77
GEN1-201ENST00000317402 FLT3P36888 993 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 STAT3P40763 770 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 FANCCQ00597 558 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 MAP7Q14244 749 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 KRT32Q14532 448 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 NFIXQ14938 502 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 MAP3K11Q16584 847 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 CCDC57Q2TAC2 916 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 DDX42Q86XP3 938 aaKnown RBP eCLIP3.99□□□□□ -1.77
GEN1-201ENST00000317402 RNF217Q8TC41 542 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 POP1Q99575 1024 aaKnown RBP3.99□□□□□ -1.77
GEN1-201ENST00000317402 C10orf88Q9H8K7 445 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 TRPM7Q96QT4 1865 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 MALRD1Q5VYJ5 2156 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 XIRP1Q702N8 1843 aaKnown RBP3.99□□□□□ -1.77
GEN1-201ENST00000317402 USP5P45974 858 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 MIGA2Q7L4E1 593 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 MYLK4Q86YV6 388 aaPredicted RBP3.99□□□□□ -1.77
GEN1-201ENST00000317402 SAAL1Q96ER3 474 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 TSPYL2Q9H2G4 693 aaPredicted RBP3.99□□□□□ -1.77
GEN1-201ENST00000317402 VCXQ9H320 206 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 C12orf65Q9H3J6 166 aaKnown RBP3.99□□□□□ -1.77
GEN1-201ENST00000317402 R3HDMLQ9H3Y0 253 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 RIPOR2Q9Y4F9 1068 aa3.99□□□□□ -1.77
GEN1-201ENST00000317402 POLR2DO15514 142 aaKnown RBP3.99□□□□□ -1.77
GEN1-201ENST00000317402 LUC7L3O95232 432 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms