RNA–Protein interactions for RNA: ENST00000315616.11

RPUSD2-201, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPUSD2, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-201ENST00000315616 PCDHA1Q9Y5I3 950 aa16.55■□□□□ 0.24
RPUSD2-201ENST00000315616 ATRNL1Q5VV63 1379 aa16.54■□□□□ 0.24
RPUSD2-201ENST00000315616 SNAP25P60880 206 aa16.54■□□□□ 0.24
RPUSD2-201ENST00000315616 ASIC1P78348 528 aa16.54■□□□□ 0.24
RPUSD2-201ENST00000315616 SPAG1Q07617 926 aa16.54■□□□□ 0.24
RPUSD2-201ENST00000315616 HPS3Q969F9 1004 aa16.54■□□□□ 0.24
RPUSD2-201ENST00000315616 DDX25Q9UHL0 483 aaKnown RBP16.54■□□□□ 0.24
RPUSD2-201ENST00000315616 ZNF215Q9UL58 517 aaPredicted RBP16.54■□□□□ 0.24
RPUSD2-201ENST00000315616 ITIH6Q6UXX5 1313 aa16.54■□□□□ 0.24
RPUSD2-201ENST00000315616 SOWAHDA6NJG2 315 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 ENTPD3O75355 529 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 MCM6Q14566 821 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 CDC37Q16543 378 aaPredicted RBP16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 CC2D2BQ6DHV5 1058 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 DUSP9Q99956 384 aaKnown RBP16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 SRRTQ9BXP5 876 aaKnown RBP16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 ARFGEF1Q9Y6D6 1849 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 MYMKA6NI61 221 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 PSMA7O14818 248 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 ZSCAN12O43309 604 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 MFAP3LO75121 409 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 ECM1Q16610 540 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 TMEM266Q2M3C6 531 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 KCNK18Q7Z418 384 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 SUPT20HQ8NEM7 779 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 DESI2Q9BSY9 194 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 L2HGDHQ9H9P8 463 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 DNAI1Q9UI46 699 aa16.53■□□□□ 0.24
RPUSD2-201ENST00000315616 GH2P01242 217 aa16.52■□□□□ 0.24
RPUSD2-201ENST00000315616 TUBB4AP04350 444 aa16.52■□□□□ 0.24
RPUSD2-201ENST00000315616 AMPD3Q01432 767 aa16.52■□□□□ 0.24
RPUSD2-201ENST00000315616 CCDC93Q567U6 631 aa16.52■□□□□ 0.24
RPUSD2-201ENST00000315616 RAD9BQ6WBX8 426 aa16.52■□□□□ 0.24
RPUSD2-201ENST00000315616 SV2BQ7L1I2 683 aa16.52■□□□□ 0.24
RPUSD2-201ENST00000315616 EEF2KMTQ96G04 330 aa16.52■□□□□ 0.24
RPUSD2-201ENST00000315616 DHTKD1Q96HY7 919 aaPredicted RBP16.52■□□□□ 0.24
RPUSD2-201ENST00000315616 P2RX7Q99572 595 aaKnown RBP16.52■□□□□ 0.24
RPUSD2-201ENST00000315616 EXOC1Q9NV70 894 aa16.52■□□□□ 0.24
RPUSD2-201ENST00000315616 A0A1W2PRG0 241 aa16.52■□□□□ 0.23
RPUSD2-201ENST00000315616 NDUFB10O96000 172 aa16.52■□□□□ 0.23
RPUSD2-201ENST00000315616 STIM1Q13586 685 aa16.52■□□□□ 0.23
RPUSD2-201ENST00000315616 ANKRD40Q6AI12 368 aa16.52■□□□□ 0.23
RPUSD2-201ENST00000315616 KIAA0895Q8NCT3 520 aa16.52■□□□□ 0.23
RPUSD2-201ENST00000315616 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.23
RPUSD2-201ENST00000315616 UIMC1Q96RL1 719 aa16.52■□□□□ 0.23
RPUSD2-201ENST00000315616 CSRNP1Q96S65 589 aa16.52■□□□□ 0.23
RPUSD2-201ENST00000315616 MEIS2O14770 477 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 ANKRD20A12PQ8NF67 263 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 SNX29Q8TEQ0 813 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 LARP4BQ92615 738 aaKnown RBP16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 TRIM47Q96LD4 638 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 THAP9Q9H5L6 903 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 STK17AQ9UEE5 414 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 TCP10L2B9ZVM9 353 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 RAD17O75943 681 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 UBXN1Q04323 297 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 P2RX5Q93086 422 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 RAB34Q9BZG1 259 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 PSME4Q14997 1843 aa16.51■□□□□ 0.23
RPUSD2-201ENST00000315616 PHLPP2Q6ZVD8 1323 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 CCNE1P24864 410 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 EEF1GP26641 437 aaKnown RBP16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 RBM26Q5T8P6 1007 aaKnown RBP16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 KRT79Q5XKE5 535 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 DYMQ7RTS9 669 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 ZNF507Q8TCN5 953 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 RAD54LQ92698 747 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 MRPL44Q9H9J2 332 aaKnown RBP16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 SLC39A2Q9NP94 309 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 PCDHA12Q9UN75 941 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 COL4A5P29400 1685 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 SMCHD1A6NHR9 2005 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 CLRN2A0PK11 232 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 TAL1P17542 331 aaPredicted RBP16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 KCNA3P22001 575 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 TMEM119Q4V9L6 283 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 RSBN1LQ6PCB5 846 aaPredicted RBP16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 CNGA4Q8IV77 575 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 CSGALNACT2Q8N6G5 542 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 TTLL6Q8N841 843 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 LRRN4CLQ8ND94 238 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 CCDC47Q96A33 483 aaKnown RBP16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 CDK5RAP3Q96JB5 506 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 GMLQ99445 158 aa16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 NAA15Q9BXJ9 866 aaKnown RBP16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 V9GYY5 206 aaPredicted RBP16.5■□□□□ 0.23
RPUSD2-201ENST00000315616 A0A0U1RQJ8 604 aa16.49■□□□□ 0.23
RPUSD2-201ENST00000315616 TULP2O00295 520 aa16.49■□□□□ 0.23
RPUSD2-201ENST00000315616 PSMD14O00487 310 aa16.49■□□□□ 0.23
RPUSD2-201ENST00000315616 NKRFO15226 690 aaKnown RBP eCLIP16.49■□□□□ 0.23
RPUSD2-201ENST00000315616 SLU7O95391 586 aaKnown RBP16.49■□□□□ 0.23
RPUSD2-201ENST00000315616 GCFC2P16383 781 aaKnown RBP16.49■□□□□ 0.23
RPUSD2-201ENST00000315616 FECHP22830 423 aa16.49■□□□□ 0.23
RPUSD2-201ENST00000315616 FBXO38Q6PIJ6 1188 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms