RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CLEC4DQ8WXI8 215 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 MPHOSPH6Q99547 160 aaKnown RBP9.55□□□□□ -0.88
TPM3-203ENST00000312970 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.55□□□□□ -0.883e-15■■■□□ 16.8
TPM3-203ENST00000312970 ZKSCAN3Q9BRR0 538 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 MFRPQ9BY79 579 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 WDR11Q9BZH6 1224 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 FAM117AQ9C073 453 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 TMEM265A0A087WTH1 108 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 RBM47A0AV96 593 aaKnown RBP9.54□□□□□ -0.88
TPM3-203ENST00000312970 B4DLN1 442 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 KDM4AO75164 1064 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 GOLGA8HP0CJ92 632 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 CSF2RAP15509 400 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 PLA2G5P39877 138 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 MRPL12P52815 198 aaKnown RBP9.54□□□□□ -0.88
TPM3-203ENST00000312970 RPS6P62753 249 aaKnown RBP9.54□□□□□ -0.88
TPM3-203ENST00000312970 TMEM240Q5SV17 173 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 TMEM63BQ5T3F8 832 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 RGS22Q8NE09 1264 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 DNERQ8NFT8 737 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 ANKS1AQ92625 1134 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 DSCC1Q9BVC3 393 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 PPP1R12CQ9BZL4 782 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 UBA5Q9GZZ9 404 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 MAF1Q9H063 256 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 KAT14Q9H8E8 782 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 ZSWIM5Q9P217 1185 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 CTNNA3Q9UI47 895 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 GRIN2DO15399 1336 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 WDR19Q8NEZ3 1342 aa9.54□□□□□ -0.88
TPM3-203ENST00000312970 NKRFO15226 690 aaKnown RBP eCLIP9.53□□□□□ -0.88
TPM3-203ENST00000312970 TRAK2O60296 914 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 FGBP02675 491 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 PTGS1P23219 599 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 CYP2C18P33260 490 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 CPT1AP50416 773 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 GRIN2CQ14957 1233 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 IMMTQ16891 758 aaKnown RBP9.53□□□□□ -0.88
TPM3-203ENST00000312970 BRDTQ58F21 947 aaPredicted RBP9.53□□□□□ -0.88
TPM3-203ENST00000312970 SLC30A10Q6XR72 485 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 ZNF365Q70YC5 407 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
TPM3-203ENST00000312970 KRT23Q9C075 422 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 TRPV6Q9H1D0 765 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 HIPK3Q9H422 1215 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 IL23AQ9NPF7 189 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 GPHNQ9NQX3 736 aaPredicted RBP9.53□□□□□ -0.88
TPM3-203ENST00000312970 NEDD4P46934 1319 aa9.53□□□□□ -0.88
TPM3-203ENST00000312970 B4E1Z4 1266 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 KPNA6O60684 536 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 SUPT20HL2P0C7V6 817 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 ACRP10323 421 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 EDNRBP24530 442 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 DNAJB2P25686 324 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 PSMC6P62333 389 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 PDAP1Q13442 181 aaKnown RBP9.52□□□□□ -0.89
TPM3-203ENST00000312970 USH1GQ495M9 461 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 RASIP1Q5U651 963 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 PSRC1Q6PGN9 363 aaPredicted RBP9.52□□□□□ -0.89
TPM3-203ENST00000312970 RPUSD2Q8IZ73 545 aaKnown RBP9.52□□□□□ -0.89
TPM3-203ENST00000312970 ADGRF4Q8IZF3 695 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 SCFD2Q8WU76 684 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 GBF1Q92538 1859 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 FAM122AQ96E09 287 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 CPVLQ9H3G5 476 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 CNNM2Q9H8M5 875 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 TCF20Q9UGU0 1960 aaKnown RBP9.52□□□□□ -0.89
TPM3-203ENST00000312970 TRANK1O15050 2925 aa9.52□□□□□ -0.89
TPM3-203ENST00000312970 PIEZO1Q92508 2521 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 LRRC37A2A6NM11 1700 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 A6NJR5 290 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 B4GALT4O60513 344 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 MYL3P08590 195 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 PARP1P09874 1014 aaKnown RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 TXNP10599 105 aaKnown RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 CCL23P55773 120 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 PURAQ00577 322 aaKnown RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 PPP2R5BQ15173 497 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 CDC37Q16543 378 aaPredicted RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 ASPRV1Q53RT3 343 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 MCF2L2Q86YR7 1114 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 ENAHQ8N8S7 591 aaPredicted RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 OR6J1Q8NGC5 347 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 HERVK_113Q902F9 699 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 TBC1D5Q92609 795 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 TIFAQ96CG3 184 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 LARP6Q9BRS8 491 aaKnown RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 UBAC1Q9BSL1 405 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 MTG1Q9BT17 334 aaPredicted RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 NOC4LQ9BVI4 516 aaKnown RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 TRAIPQ9BWF2 469 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 ALDH8A1Q9H2A2 487 aaPredicted RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 MTIF3Q9H2K0 278 aaKnown RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 ZNF576Q9H609 170 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 VAT1LQ9HCJ6 419 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 SUPT16HQ9Y5B9 1047 aaKnown RBP9.51□□□□□ -0.89
TPM3-203ENST00000312970 ABCB11O95342 1321 aa9.51□□□□□ -0.89
TPM3-203ENST00000312970 RAD50Q92878 1312 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms