RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 IGF2BP3O00425 579 aaKnown RBP eCLIP14.31□□□□□ -0.12
VANGL1-201ENST00000310260 LMAN1P49257 510 aa14.31□□□□□ -0.12
VANGL1-201ENST00000310260 ZNF543Q08ER8 600 aa14.31□□□□□ -0.12
VANGL1-201ENST00000310260 USP17L24Q0WX57 530 aa14.31□□□□□ -0.12
VANGL1-201ENST00000310260 RSRC2Q7L4I2 434 aaKnown RBP14.31□□□□□ -0.12
VANGL1-201ENST00000310260 PROCA1Q8NCQ7 364 aaPredicted RBP14.31□□□□□ -0.12
VANGL1-201ENST00000310260 DCAF4Q8WV16 495 aa14.31□□□□□ -0.12
VANGL1-201ENST00000310260 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
VANGL1-201ENST00000310260 ARFGAP3Q9NP61 516 aa14.31□□□□□ -0.12
VANGL1-201ENST00000310260 GEMIN8Q9NWZ8 242 aaKnown RBP14.31□□□□□ -0.12
VANGL1-201ENST00000310260 MAD2L2Q9UI95 211 aa14.31□□□□□ -0.12
VANGL1-201ENST00000310260 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
VANGL1-201ENST00000310260 WDR46O15213 610 aaKnown RBP14.3□□□□□ -0.12
VANGL1-201ENST00000310260 DDAH1O94760 285 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 PLEKHA8P1O95397 391 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 CDC27P30260 824 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 KIF5BP33176 963 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 SREBF2Q12772 1141 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 NCAPHQ15003 741 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 ICE2Q659A1 982 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 P2RX7Q99572 595 aaKnown RBP14.3□□□□□ -0.12
VANGL1-201ENST00000310260 ASCC2Q9H1I8 757 aaPredicted RBP14.3□□□□□ -0.12
VANGL1-201ENST00000310260 GREB1LQ9C091 1923 aaPredicted RBP14.3□□□□□ -0.12
VANGL1-201ENST00000310260 PHIPQ8WWQ0 1821 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 CALM1P0DP23 149 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 CALM2P0DP24 149 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 CALM3P0DP25 149 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 ACTN2P35609 894 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 SCRN1Q12765 414 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 GRM4Q14833 912 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 IFNL1Q8IU54 200 aa14.3□□□□□ -0.12
VANGL1-201ENST00000310260 SMCR8Q8TEV9 937 aaPredicted RBP14.3□□□□□ -0.12
VANGL1-201ENST00000310260 BAZ2BQ9UIF8 2168 aaKnown RBP14.29□□□□□ -0.12
VANGL1-201ENST00000310260 VWA3AA6NCI4 1184 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 CPLX1O14810 134 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 STAT2P52630 851 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 CATSPERGQ6ZRH7 1159 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 FBXL16Q8N461 479 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 MRPS27Q92552 414 aaKnown RBP14.29□□□□□ -0.12
VANGL1-201ENST00000310260 ZNF274Q96GC6 653 aaPredicted RBP14.29□□□□□ -0.12
VANGL1-201ENST00000310260 C12orf42Q96LP6 360 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 PAGR1Q9BTK6 254 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 CTDP1Q9Y5B0 961 aaPredicted RBP14.29□□□□□ -0.12
VANGL1-201ENST00000310260 OSBPP22059 807 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 ME1P48163 572 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 INHBEP58166 350 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 PLS1Q14651 629 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 COG2Q14746 738 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 ASPRV1Q53RT3 343 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 GPATCH4Q5T3I0 446 aaKnown RBP14.29□□□□□ -0.12
VANGL1-201ENST00000310260 ATL3Q6DD88 541 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 OTUD7BQ6GQQ9 843 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 CHURC1Q8WUH1 139 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 ATG4CQ96DT6 458 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 KIAA1468Q9P260 1216 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 FEM1BQ9UK73 627 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 SYNPO2Q9UMS6 1093 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 MRFAP1Q9Y605 127 aa14.29□□□□□ -0.12
VANGL1-201ENST00000310260 PALM3A6NDB9 673 aaPredicted RBP14.28□□□□□ -0.12
VANGL1-201ENST00000310260 TRPA1O75762 1119 aa14.28□□□□□ -0.12
VANGL1-201ENST00000310260 SNHG28P0DPA3 235 aa14.28□□□□□ -0.12
VANGL1-201ENST00000310260 FOSBP53539 338 aa14.28□□□□□ -0.12
VANGL1-201ENST00000310260 PPP2R3AQ06190 1150 aa14.28□□□□□ -0.12
VANGL1-201ENST00000310260 PABPC4Q13310 644 aaKnown RBP eCLIP14.28□□□□□ -0.12
VANGL1-201ENST00000310260 TAF1CQ15572 869 aaPredicted RBP14.28□□□□□ -0.12
VANGL1-201ENST00000310260 CCDC174Q6PII3 467 aa14.28□□□□□ -0.12
VANGL1-201ENST00000310260 CPXCR1Q8N123 301 aa14.28□□□□□ -0.12
VANGL1-201ENST00000310260 SRBD1Q8N5C6 995 aaKnown RBP14.28□□□□□ -0.12
VANGL1-201ENST00000310260 NSUN7Q8NE18 718 aaKnown RBP14.28□□□□□ -0.12
VANGL1-201ENST00000310260 PHKBQ93100 1093 aa14.28□□□□□ -0.12
VANGL1-201ENST00000310260 SLF1Q9BQI6 1058 aa14.28□□□□□ -0.12
VANGL1-201ENST00000310260 PARD6BQ9BYG5 372 aa14.28□□□□□ -0.12
VANGL1-201ENST00000310260 HSD3B7Q9H2F3 369 aa14.28□□□□□ -0.12
VANGL1-201ENST00000310260 FAM217BQ9NTX9 383 aaPredicted RBP14.28□□□□□ -0.12
VANGL1-201ENST00000310260 MAP2K7O14733 419 aa14.27□□□□□ -0.12
VANGL1-201ENST00000310260 GTF2A1P52655 376 aaPredicted RBP14.27□□□□□ -0.12
VANGL1-201ENST00000310260 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.12
VANGL1-201ENST00000310260 ANKRD23Q86SG2 305 aa14.27□□□□□ -0.12
VANGL1-201ENST00000310260 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.12
VANGL1-201ENST00000310260 TEX2Q8IWB9 1127 aa14.27□□□□□ -0.12
VANGL1-201ENST00000310260 ADGRF4Q8IZF3 695 aa14.27□□□□□ -0.12
VANGL1-201ENST00000310260 PRPF38AQ8NAV1 312 aaKnown RBP14.27□□□□□ -0.12
VANGL1-201ENST00000310260 RABGGTAQ92696 567 aa14.27□□□□□ -0.12
VANGL1-201ENST00000310260 ZNF396Q96N95 335 aaPredicted RBP14.27□□□□□ -0.12
VANGL1-201ENST00000310260 LLPHQ9BRT6 129 aaKnown RBP14.27□□□□□ -0.12
VANGL1-201ENST00000310260 PRR12Q9ULL5 1215 aa14.27□□□□□ -0.12
VANGL1-201ENST00000310260 TAL1P17542 331 aaPredicted RBP14.27□□□□□ -0.13
VANGL1-201ENST00000310260 MAP2K2P36507 400 aa14.27□□□□□ -0.13
VANGL1-201ENST00000310260 TM4SF4P48230 202 aa14.27□□□□□ -0.13
VANGL1-201ENST00000310260 NDUFA8P51970 172 aa14.27□□□□□ -0.13
VANGL1-201ENST00000310260 FANCCQ00597 558 aa14.27□□□□□ -0.13
VANGL1-201ENST00000310260 TMEM139Q8IV31 216 aa14.27□□□□□ -0.13
VANGL1-201ENST00000310260 WDR24Q96S15 920 aa14.27□□□□□ -0.13
VANGL1-201ENST00000310260 SDF4Q9BRK5 362 aa14.27□□□□□ -0.13
VANGL1-201ENST00000310260 HOXC10Q9NYD6 342 aa14.27□□□□□ -0.13
VANGL1-201ENST00000310260 PCDHA7Q9UN72 937 aa14.27□□□□□ -0.13
VANGL1-201ENST00000310260 V9GY48 417 aaPredicted RBP14.27□□□□□ -0.13
VANGL1-201ENST00000310260 CCDC196A0A1B0GTZ2 297 aa14.26□□□□□ -0.13
VANGL1-201ENST00000310260 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
VANGL1-201ENST00000310260 PFKFB2O60825 505 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms