RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 C10orf71Q711Q0 1435 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 KLRG2A4D1S0 409 aaPredicted RBP16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 POTEMA6NI47 508 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 RIMBP2O15034 1052 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 RHOXF2BP0C7M4 288 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 TRIM21P19474 475 aaKnown RBP16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 ZNF543Q08ER8 600 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 UBE2SQ16763 222 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 KCNK18Q7Z418 384 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 LARP4BQ92615 738 aaKnown RBP16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 RAD54LQ92698 747 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 JAKMIP2Q96AA8 810 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 RHOXF2Q9BQY4 288 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 NHEJ1Q9H9Q4 299 aaPredicted RBP16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 RIC8AQ9NPQ8 531 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 HDAC6Q9UBN7 1215 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 GREB1LQ9C091 1923 aaPredicted RBP16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 PVALEFA0A1B0GWK0 134 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 A0A1W2PQJ5 194 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 F8W031 263 aaPredicted RBP16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 ATP1A1P05023 1023 aaKnown RBP16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 TUBB4BP68371 445 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 TMEM266Q2M3C6 531 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 FIGNQ5HY92 759 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 CCDC122Q5T0U0 273 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 TTBK2Q6IQ55 1244 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 PPP1R18Q6NYC8 613 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 ADGRF4Q8IZF3 695 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 MXD3Q9BW11 206 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 LACRTQ9GZZ8 138 aa16.97■□□□□ 0.31
SPIRE1-201ENST00000309836 EIF3CLB5ME19 914 aaKnown RBP16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 H3BQF6 201 aa16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 PPEF1O14829 653 aaPredicted RBP16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 SHMT1P34896 483 aa16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 CYLC1P35663 651 aaPredicted RBP16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 TNNI2P48788 182 aa16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 VSNL1P62760 191 aa16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 KRT83P78385 493 aa16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 DYMQ7RTS9 669 aa16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 KIAA1328Q86T90 577 aa16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 PCMTD1Q96MG8 357 aaPredicted RBP16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 EIF3CQ99613 913 aaKnown RBP16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 ABCB6Q9NP58 842 aa16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 ZCCHC17Q9NP64 241 aaKnown RBP16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 ZNHIT6Q9NWK9 470 aaKnown RBP16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 SIK3Q9Y2K2 1263 aa16.96■□□□□ 0.31
SPIRE1-201ENST00000309836 PNMA6FA0A0J9YX94 578 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 ENC1O14682 589 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 TTLL1O95922 423 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 CYP2C19P33261 490 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 CLK2P49760 499 aaKnown RBP16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 CDK17Q00537 523 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 EHHADHQ08426 723 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 PDIA5Q14554 519 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 ECM1Q16610 540 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 VWA3BQ502W6 1294 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 CCDC170Q8IYT3 715 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 SNX29Q8TEQ0 813 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 CDK5RAP3Q96JB5 506 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 ANKRD31Q8N7Z5 1873 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 EPHB6O15197 1021 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 FKBP15Q5T1M5 1219 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 PAPD7Q5XG87 772 aaKnown RBP16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 GUF1Q8N442 669 aaKnown RBP16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 GLIS3Q8NEA6 775 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 PURBQ96QR8 312 aaKnown RBP16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 COA1Q9GZY4 146 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 USP40Q9NVE5 1235 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 SUGT1Q9Y2Z0 365 aa16.95■□□□□ 0.3
SPIRE1-201ENST00000309836 SPATA31A6Q5VVP1 1343 aa16.94■□□□□ 0.3
SPIRE1-201ENST00000309836 MYO3BQ8WXR4 1341 aa16.94■□□□□ 0.3
SPIRE1-201ENST00000309836 ZNF263O14978 683 aa16.94■□□□□ 0.3
SPIRE1-201ENST00000309836 LRRC55Q6ZSA7 311 aa16.94■□□□□ 0.3
SPIRE1-201ENST00000309836 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
SPIRE1-201ENST00000309836 HAS1Q92839 578 aa16.94■□□□□ 0.3
SPIRE1-201ENST00000309836 SERPINB13Q9UIV8 391 aa16.94■□□□□ 0.3
SPIRE1-201ENST00000309836 L1RE1Q9UN81 338 aa16.94■□□□□ 0.3
SPIRE1-201ENST00000309836 USP17L10C9JJH3 530 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 SRGAP2O75044 1071 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 PLEKP08567 350 aaPredicted RBP16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 SLURP2P0DP57 97 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 HNRNPH3P31942 346 aaKnown RBP16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 SLC16A2P36021 539 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 CYP27A1Q02318 531 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 KRT79Q5XKE5 535 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 PPP4R3AQ6IN85 833 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 TMC4Q7Z404 712 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 DDX12PQ92771 950 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 GJA10Q969M2 543 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 MTMR8Q96EF0 704 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 MMS19Q96T76 1030 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 NDST4Q9H3R1 872 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 SUGCTQ9HAC7 445 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 SWAP70Q9UH65 585 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 ATP6V0A2Q9Y487 856 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 MYH7BA7E2Y1 1941 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms