RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 NFIBO00712 420 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 ICAM1P05362 532 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 GCFC2P16383 781 aaKnown RBP12.54□□□□□ -0.4
TRIM59-201ENST00000309784 EIF2AK2P19525 551 aaKnown RBP12.54□□□□□ -0.4
TRIM59-201ENST00000309784 FMR1Q06787 632 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRIM59-201ENST00000309784 MCF2L2Q86YR7 1114 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 CCDC47Q96A33 483 aaKnown RBP12.54□□□□□ -0.4
TRIM59-201ENST00000309784 WDR18Q9BV38 432 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 ZHX3Q9H4I2 956 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 RNF146Q9NTX7 359 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 DDX39AO00148 427 aaKnown RBP12.54□□□□□ -0.4
TRIM59-201ENST00000309784 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 DPCR1Q3MIW9 517 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 HSP90AA4PQ58FG1 418 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 MCTP2Q6DN12 878 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 RBM46Q8TBY0 533 aaKnown RBP12.54□□□□□ -0.4
TRIM59-201ENST00000309784 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
TRIM59-201ENST00000309784 IRF6O14896 467 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 KRT18P05783 430 aaKnown RBP12.53□□□□□ -0.4
TRIM59-201ENST00000309784 CCT6AP40227 531 aaKnown RBP12.53□□□□□ -0.4
TRIM59-201ENST00000309784 SLFN14P0C7P3 912 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 IDEP14735 1019 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 GRM1Q13255 1194 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 PLA2G4DQ86XP0 818 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 HOXC10Q9NYD6 342 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 ZNF112Q9UJU3 913 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 SNCAIPQ9Y6H5 919 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 IL17AQ16552 155 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 RNF207Q6ZRF8 634 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 SPC24Q8NBT2 197 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 L3MBTL3Q96JM7 780 aaPredicted RBP12.53□□□□□ -0.4
TRIM59-201ENST00000309784 SAMM50Q9Y512 469 aa12.53□□□□□ -0.4
TRIM59-201ENST00000309784 ZNF646O15015 1829 aaPredicted RBP12.53□□□□□ -0.4
TRIM59-201ENST00000309784 CDK11BP21127 795 aaKnown RBP12.52□□□□□ -0.4
TRIM59-201ENST00000309784 NCAPG2Q86XI2 1143 aa12.52□□□□□ -0.4
TRIM59-201ENST00000309784 DISC1Q9NRI5 854 aa12.52□□□□□ -0.4
TRIM59-201ENST00000309784 A0A087X0B3 334 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 TULP1O00294 542 aaPredicted RBP12.52□□□□□ -0.41
TRIM59-201ENST00000309784 VWA5AO00534 786 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 PLCG1P19174 1290 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 CCDC173Q0VFZ6 552 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 ARHGEF16Q5VV41 709 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 ERO1BQ86YB8 467 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 USP11P51784 963 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 NLRP12P59046 1061 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 ASIC1P78348 528 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 OPTNQ96CV9 577 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 AK8Q96MA6 479 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 SLC38A10Q9HBR0 1119 aa12.52□□□□□ -0.41
TRIM59-201ENST00000309784 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
TRIM59-201ENST00000309784 ADCY5O95622 1261 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 PRPHP41219 470 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 CYP4A11Q02928 519 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 ANKRD35Q8N283 1001 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 ERMNQ8TAM6 284 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 CYP2W1Q8TAV3 490 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 SMCR8Q8TEV9 937 aaPredicted RBP12.51□□□□□ -0.41
TRIM59-201ENST00000309784 PAGE5Q96GU1 130 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 WNK4Q96J92 1243 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 DACH1Q9UI36 760 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 MAPK8IP1Q9UQF2 711 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 STAT3P40763 770 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 MUM1L1Q5H9M0 696 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 MYH15Q9Y2K3 1946 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 CELF2O95319 508 aaKnown RBP12.51□□□□□ -0.41
TRIM59-201ENST00000309784 STX17P56962 302 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 RPS6P62753 249 aaKnown RBP12.51□□□□□ -0.41
TRIM59-201ENST00000309784 SP4Q02446 784 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 PPP4R3AQ6IN85 833 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 SLC30A10Q6XR72 485 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
TRIM59-201ENST00000309784 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 SLFN12Q8IYM2 578 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 C4orf32Q8N8J7 132 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
TRIM59-201ENST00000309784 AFG3L2Q9Y4W6 797 aa12.51□□□□□ -0.41
TRIM59-201ENST00000309784 PEX10O60683 326 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 CAVIN2O95810 425 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 CLK2P49760 499 aaKnown RBP12.5□□□□□ -0.41
TRIM59-201ENST00000309784 AMPD3Q01432 767 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 TREML2Q5T2D2 321 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 RMDN3Q96TC7 470 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 FUCA2Q9BTY2 467 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 ACTN4O43707 911 aaKnown RBP12.5□□□□□ -0.41
TRIM59-201ENST00000309784 GAS7O60861 476 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 DSG3P32926 999 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 RAD51AP2Q09MP3 1159 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 BAATQ14032 418 aaPredicted RBP12.5□□□□□ -0.41
TRIM59-201ENST00000309784 UVSSAQ2YD98 709 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 TEX13BQ9BXU2 312 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
TRIM59-201ENST00000309784 SBF1O95248 1867 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 LRCH2Q5VUJ6 765 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 SV2BQ7L1I2 683 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 SMYD4Q8IYR2 804 aaPredicted RBP12.5□□□□□ -0.41
TRIM59-201ENST00000309784 C2orf69Q8N8R5 385 aa12.5□□□□□ -0.41
TRIM59-201ENST00000309784 SMTNL1A8MU46 457 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 PLA2G6O60733 806 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 SREBF1P36956 1147 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 ORC2Q13416 577 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms