RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 ZEB2O60315 1214 aa22.79■■□□□ 1.24
VEGFB-201ENST00000309422 CCND2P30279 289 aa22.79■■□□□ 1.24
VEGFB-201ENST00000309422 STK3Q13188 491 aa22.79■■□□□ 1.24
VEGFB-201ENST00000309422 TTLL4Q14679 1199 aa22.79■■□□□ 1.24
VEGFB-201ENST00000309422 IQSEC1Q6DN90 963 aa22.79■■□□□ 1.24
VEGFB-201ENST00000309422 CCDC148Q8NFR7 591 aa22.79■■□□□ 1.24
VEGFB-201ENST00000309422 DPF3Q92784 378 aa22.79■■□□□ 1.24
VEGFB-201ENST00000309422 GPKOWQ92917 476 aaPredicted RBP eCLIP22.79■■□□□ 1.24
VEGFB-201ENST00000309422 SLC26A6Q9BXS9 759 aa22.79■■□□□ 1.24
VEGFB-201ENST00000309422 RNF26Q9BY78 433 aaPredicted RBP22.79■■□□□ 1.24
VEGFB-201ENST00000309422 ALDH8A1Q9H2A2 487 aaPredicted RBP22.79■■□□□ 1.24
VEGFB-201ENST00000309422 ASTN1O14525 1302 aa22.79■■□□□ 1.24
VEGFB-201ENST00000309422 ZNFX1Q9P2E3 1918 aaKnown RBP22.79■■□□□ 1.24
VEGFB-201ENST00000309422 C6orf222P0C671 652 aaPredicted RBP22.78■■□□□ 1.24
VEGFB-201ENST00000309422 MYCLP12524 364 aaPredicted RBP22.78■■□□□ 1.24
VEGFB-201ENST00000309422 SCG2P13521 617 aa22.78■■□□□ 1.24
VEGFB-201ENST00000309422 EDNRBP24530 442 aa22.78■■□□□ 1.24
VEGFB-201ENST00000309422 ADCYAP1R1P41586 468 aa22.78■■□□□ 1.24
VEGFB-201ENST00000309422 ADCY7P51828 1080 aa22.78■■□□□ 1.24
VEGFB-201ENST00000309422 SSRP1Q08945 709 aaKnown RBP22.78■■□□□ 1.24
VEGFB-201ENST00000309422 PCSK9Q8NBP7 692 aaKnown RBP22.78■■□□□ 1.24
VEGFB-201ENST00000309422 TBC1D5Q92609 795 aa22.78■■□□□ 1.24
VEGFB-201ENST00000309422 IL17RAQ96F46 866 aa22.78■■□□□ 1.24
VEGFB-201ENST00000309422 MYH6P13533 1939 aa22.78■■□□□ 1.24
VEGFB-201ENST00000309422 PIK3CDO00329 1044 aa22.77■■□□□ 1.24
VEGFB-201ENST00000309422 NKRFO15226 690 aaKnown RBP eCLIP22.77■■□□□ 1.24
VEGFB-201ENST00000309422 IFNAR1P17181 557 aa22.77■■□□□ 1.24
VEGFB-201ENST00000309422 AK2P54819 239 aa22.77■■□□□ 1.24
VEGFB-201ENST00000309422 PFKFB3Q16875 520 aaPredicted RBP22.77■■□□□ 1.24
VEGFB-201ENST00000309422 GNPTABQ3T906 1256 aa22.77■■□□□ 1.24
VEGFB-201ENST00000309422 GJC2Q5T442 439 aaPredicted RBP22.77■■□□□ 1.24
VEGFB-201ENST00000309422 WWC2Q6AWC2 1192 aa22.77■■□□□ 1.24
VEGFB-201ENST00000309422 TLK2Q86UE8 772 aa22.77■■□□□ 1.24
VEGFB-201ENST00000309422 BARHL2Q9NY43 387 aa22.77■■□□□ 1.24
VEGFB-201ENST00000309422 COL20A1Q9P218 1284 aa22.77■■□□□ 1.24
VEGFB-201ENST00000309422 SYNRGQ9UMZ2 1314 aa22.77■■□□□ 1.24
VEGFB-201ENST00000309422 BRCA2P51587 3418 aa22.77■■□□□ 1.24
VEGFB-201ENST00000309422 OPLAHO14841 1288 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 PRPF3O43395 683 aaKnown RBP22.76■■□□□ 1.23
VEGFB-201ENST00000309422 EIF3JO75822 258 aaKnown RBP22.76■■□□□ 1.23
VEGFB-201ENST00000309422 PGK1P00558 417 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 NR3C2P08235 984 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 LRRC41Q15345 812 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 DIS3LQ8TF46 1054 aaKnown RBP22.76■■□□□ 1.23
VEGFB-201ENST00000309422 PDCD2LQ9BRP1 358 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 WDR11Q9BZH6 1224 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 KATNBL1Q9H079 304 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 NCOA5Q9HCD5 579 aaKnown RBP22.76■■□□□ 1.23
VEGFB-201ENST00000309422 FAM217BQ9NTX9 383 aaPredicted RBP22.76■■□□□ 1.23
VEGFB-201ENST00000309422 STAM2O75886 525 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 XBP1P17861 261 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 KCNV1Q6PIU1 500 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 SEPT14Q6ZU15 432 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 IL27Q8NEV9 243 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 PHKBQ93100 1093 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 LENG1Q96BZ8 264 aaPredicted RBP22.76■■□□□ 1.23
VEGFB-201ENST00000309422 LARP6Q9BRS8 491 aaKnown RBP22.76■■□□□ 1.23
VEGFB-201ENST00000309422 SENP6Q9GZR1 1112 aaPredicted RBP22.76■■□□□ 1.23
VEGFB-201ENST00000309422 C6orf50Q9HD87 102 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 Q9Y3F1 56 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 NR2E3Q9Y5X4 410 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 MRVI1Q9Y6F6 885 aa22.76■■□□□ 1.23
VEGFB-201ENST00000309422 MOXD2PA6NHM9 499 aa22.75■■□□□ 1.23
VEGFB-201ENST00000309422 ST18O60284 1047 aa22.75■■□□□ 1.23
VEGFB-201ENST00000309422 DEXIO95424 95 aa22.75■■□□□ 1.23
VEGFB-201ENST00000309422 GNA11P29992 359 aa22.75■■□□□ 1.23
VEGFB-201ENST00000309422 FUT2Q10981 343 aa22.75■■□□□ 1.23
VEGFB-201ENST00000309422 MCTP2Q6DN12 878 aa22.75■■□□□ 1.23
VEGFB-201ENST00000309422 BICD2Q8TD16 824 aa22.75■■□□□ 1.23
VEGFB-201ENST00000309422 TSEN34Q9BSV6 310 aaKnown RBP22.75■■□□□ 1.23
VEGFB-201ENST00000309422 SMCO2A6NFE2 343 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 STXBP3O00186 592 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 EVI5O60447 810 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 FOSP01100 380 aaPredicted RBP22.74■■□□□ 1.23
VEGFB-201ENST00000309422 TXNP10599 105 aaKnown RBP22.74■■□□□ 1.23
VEGFB-201ENST00000309422 CPT1AP50416 773 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 GJA9P57773 515 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 PGM5Q15124 567 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 RABEP1Q15276 862 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 DUSP28Q4G0W2 176 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 GNASQ5JWF2 1037 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 TAPT1Q6NXT6 567 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 XRRA1Q6P2D8 792 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 USP17L6PQ6QN14 398 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 UBE2Q1Q7Z7E8 422 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 OR6J1Q8NGC5 347 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 GLT1D1Q96MS3 346 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 RIC8AQ9NPQ8 531 aa22.74■■□□□ 1.23
VEGFB-201ENST00000309422 DDX49Q9Y6V7 483 aaKnown RBP22.74■■□□□ 1.23
VEGFB-201ENST00000309422 DYNC1LI2O43237 492 aaPredicted RBP22.73■■□□□ 1.23
VEGFB-201ENST00000309422 SMPD1P17405 629 aa22.73■■□□□ 1.23
VEGFB-201ENST00000309422 RBM25P49756 843 aaKnown RBP22.73■■□□□ 1.23
VEGFB-201ENST00000309422 AP3B2Q13367 1082 aa22.73■■□□□ 1.23
VEGFB-201ENST00000309422 FSCN1Q16658 493 aaKnown RBP22.73■■□□□ 1.23
VEGFB-201ENST00000309422 WASF1Q92558 559 aa22.73■■□□□ 1.23
VEGFB-201ENST00000309422 VTI1AQ96AJ9 217 aa22.73■■□□□ 1.23
VEGFB-201ENST00000309422 PDGFCQ9NRA1 345 aa22.73■■□□□ 1.23
VEGFB-201ENST00000309422 TPCN1Q9ULQ1 816 aa22.73■■□□□ 1.23
VEGFB-201ENST00000309422 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.72■■□□□ 1.23
VEGFB-201ENST00000309422 PFKFB2O60825 505 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms