RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 FAM47CQ5HY64 1035 aa14.3□□□□□ -0.12
TPT1-201ENST00000309246 SYMPKQ92797 1274 aaKnown RBP14.3□□□□□ -0.12
TPT1-201ENST00000309246 COPS5Q92905 334 aa14.3□□□□□ -0.12
TPT1-201ENST00000309246 VWCEQ96DN2 955 aa14.3□□□□□ -0.12
TPT1-201ENST00000309246 FAM212AQ96EL1 285 aa14.3□□□□□ -0.12
TPT1-201ENST00000309246 TTC14Q96N46 770 aa14.3□□□□□ -0.12
TPT1-201ENST00000309246 MTG1Q9BT17 334 aaPredicted RBP14.3□□□□□ -0.12
TPT1-201ENST00000309246 PCP11498 1178 aaKnown RBP14.29□□□□□ -0.12
TPT1-201ENST00000309246 SDSP20132 328 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 IGFBP4P22692 258 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 EDNRBP24530 442 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 TJAP1Q5JTD0 557 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 B4GALNT3Q6L9W6 998 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 DEFB128Q7Z7B8 93 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 TICAM2Q86XR7 235 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 RPUSD2Q8IZ73 545 aaKnown RBP14.29□□□□□ -0.12
TPT1-201ENST00000309246 ESR2Q92731 530 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 MPHOSPH6Q99547 160 aaKnown RBP14.29□□□□□ -0.12
TPT1-201ENST00000309246 UBA5Q9GZZ9 404 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 RNF41Q9H4P4 317 aaPredicted RBP14.29□□□□□ -0.12
TPT1-201ENST00000309246 SLC28A3Q9HAS3 691 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 GPHNQ9NQX3 736 aaPredicted RBP14.29□□□□□ -0.12
TPT1-201ENST00000309246 PNMA2Q9UL42 364 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 SLC4A7Q9Y6M7 1214 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 RAD50Q92878 1312 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 A0A0C4DFX4 3053 aa14.29□□□□□ -0.12
TPT1-201ENST00000309246 NKRFO15226 690 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■□□□ 13.5
TPT1-201ENST00000309246 SUPT20HL2P0C7V6 817 aa14.28□□□□□ -0.12
TPT1-201ENST00000309246 MYOGP15173 224 aa14.28□□□□□ -0.12
TPT1-201ENST00000309246 MFAP1P55081 439 aaKnown RBP14.28□□□□□ -0.12
TPT1-201ENST00000309246 TTLL4Q14679 1199 aa14.28□□□□□ -0.12
TPT1-201ENST00000309246 CCDC85BQ15834 202 aaPredicted RBP14.28□□□□□ -0.12
TPT1-201ENST00000309246 NBPF20Q3BBV1 942 aa14.28□□□□□ -0.12
TPT1-201ENST00000309246 GPATCH4Q5T3I0 446 aaKnown RBP14.28□□□□□ -0.12
TPT1-201ENST00000309246 RASEFQ8IZ41 740 aa14.28□□□□□ -0.12
TPT1-201ENST00000309246 DNERQ8NFT8 737 aa14.28□□□□□ -0.12
TPT1-201ENST00000309246 SCFD2Q8WU76 684 aa14.28□□□□□ -0.12
TPT1-201ENST00000309246 TCF20Q9UGU0 1960 aaKnown RBP14.28□□□□□ -0.12
TPT1-201ENST00000309246 ZNF213O14771 459 aa14.27□□□□□ -0.13
TPT1-201ENST00000309246 KDM4AO75164 1064 aa14.27□□□□□ -0.13
TPT1-201ENST00000309246 ARIH2O95376 493 aa14.27□□□□□ -0.13
TPT1-201ENST00000309246 TXNP10599 105 aaKnown RBP14.27□□□□□ -0.13
TPT1-201ENST00000309246 ATP2A2P16615 1042 aaKnown RBP14.27□□□□□ -0.13
TPT1-201ENST00000309246 CDC37Q16543 378 aaPredicted RBP14.27□□□□□ -0.13
TPT1-201ENST00000309246 BRDTQ58F21 947 aaPredicted RBP14.27□□□□□ -0.13
TPT1-201ENST00000309246 PPP2R2DQ66LE6 453 aa14.27□□□□□ -0.13
TPT1-201ENST00000309246 PLEKHM2Q8IWE5 1019 aa14.27□□□□□ -0.13
TPT1-201ENST00000309246 SMC5Q8IY18 1101 aa14.27□□□□□ -0.13
TPT1-201ENST00000309246 PNMA1Q8ND90 353 aa14.27□□□□□ -0.13
TPT1-201ENST00000309246 THEGQ9P2T0 379 aa14.27□□□□□ -0.13
TPT1-201ENST00000309246 A6NJR5 290 aa14.26□□□□□ -0.13
TPT1-201ENST00000309246 B4E1Z4 1266 aa14.26□□□□□ -0.13
TPT1-201ENST00000309246 PFKMP08237 780 aa14.26□□□□□ -0.13
TPT1-201ENST00000309246 CHMP4BP1P59074 171 aa14.26□□□□□ -0.13
TPT1-201ENST00000309246 CWC27Q6UX04 472 aaKnown RBP14.26□□□□□ -0.13
TPT1-201ENST00000309246 DGKHQ86XP1 1220 aa14.26□□□□□ -0.13
TPT1-201ENST00000309246 TBC1D5Q92609 795 aa14.26□□□□□ -0.13
TPT1-201ENST00000309246 KAT14Q9H8E8 782 aa14.26□□□□□ -0.13
TPT1-201ENST00000309246 DIAPH3Q9NSV4 1193 aa14.26□□□□□ -0.13
TPT1-201ENST00000309246 PCDHA11Q9Y5I1 949 aa14.26□□□□□ -0.13
TPT1-201ENST00000309246 COL4A4P53420 1690 aaPredicted RBP14.26□□□□□ -0.13
TPT1-201ENST00000309246 ABCB11O95342 1321 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 PRUNE2Q8WUY3 3088 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 B4DLN1 442 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 KPNA6O60684 536 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 MRPL12P52815 198 aaKnown RBP14.25□□□□□ -0.13
TPT1-201ENST00000309246 NFRKBQ6P4R8 1299 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 SEPT14Q6ZU15 432 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 CHD1LQ86WJ1 897 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 IQCA1Q86XH1 822 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 ADGRF4Q8IZF3 695 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 TAAR1Q96RJ0 339 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 TSPYL2Q9H2G4 693 aaPredicted RBP14.25□□□□□ -0.13
TPT1-201ENST00000309246 RWDD1Q9H446 243 aaPredicted RBP14.25□□□□□ -0.13
TPT1-201ENST00000309246 COL20A1Q9P218 1284 aa14.25□□□□□ -0.13
TPT1-201ENST00000309246 DHX16O60231 1041 aaKnown RBP14.24□□□□□ -0.13
TPT1-201ENST00000309246 IGHDP01880 384 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 IQCF3P0C7M6 154 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 QRICH1Q2TAL8 776 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 ASPRV1Q53RT3 343 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 CCDC62Q6P9F0 684 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 MICALL1Q8N3F8 863 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 ENAHQ8N8S7 591 aaPredicted RBP14.24□□□□□ -0.13
TPT1-201ENST00000309246 RETREG2Q8NC44 543 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 RGS22Q8NE09 1264 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 SYTL5Q8TDW5 730 aaPredicted RBP14.24□□□□□ -0.13
TPT1-201ENST00000309246 AFG1LQ8WV93 481 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 ATXN2LQ8WWM7 1075 aaKnown RBP14.24□□□□□ -0.13
TPT1-201ENST00000309246 ZSCAN10Q96SZ4 725 aaPredicted RBP14.24□□□□□ -0.13
TPT1-201ENST00000309246 OSBPL3Q9H4L5 887 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 NOD1Q9Y239 953 aa14.24□□□□□ -0.13
TPT1-201ENST00000309246 PRRC2BQ5JSZ5 2229 aaKnown RBP14.23□□□□□ -0.13
TPT1-201ENST00000309246 BAZ2BQ9UIF8 2168 aaKnown RBP14.23□□□□□ -0.13
TPT1-201ENST00000309246 TNFRSF10AO00220 468 aa14.23□□□□□ -0.13
TPT1-201ENST00000309246 GH1P01241 217 aa14.23□□□□□ -0.13
TPT1-201ENST00000309246 CA3P07451 260 aa14.23□□□□□ -0.13
TPT1-201ENST00000309246 MMP3P08254 477 aa14.23□□□□□ -0.13
TPT1-201ENST00000309246 ACTN1P12814 892 aa14.23□□□□□ -0.13
TPT1-201ENST00000309246 RFC2P35250 354 aa14.23□□□□□ -0.13
TPT1-201ENST00000309246 PTPN11Q06124 597 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms