RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 RTKN2Q8IZC4 609 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 GPC2Q8N158 579 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 TCF12Q99081 682 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 PSMD1Q99460 953 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 PIDD1Q9HB75 910 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 JAG2Q9Y219 1238 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 LRRC37AA6NMS7 1700 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 PSME4Q14997 1843 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 SHTN1A0MZ66 631 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 NFIBO00712 420 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 NTSR2O95665 410 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 INHBBP09529 407 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 GPTP24298 496 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 AFMP43652 599 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 USP5P45974 858 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 ZP2Q05996 745 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 TAF7Q15545 349 aaPredicted RBP6.09□□□□□ -1.43
CKS1B-201ENST00000308987 SUSD4Q5VX71 490 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 DLK2Q6UY11 383 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 PNMA8AQ86V59 439 aaPredicted RBP6.09□□□□□ -1.43
CKS1B-201ENST00000308987 SMYD4Q8IYR2 804 aaPredicted RBP6.09□□□□□ -1.43
CKS1B-201ENST00000308987 CAPNS2Q96L46 248 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 THUMPD2Q9BTF0 503 aaKnown RBP6.09□□□□□ -1.43
CKS1B-201ENST00000308987 DUSP23Q9BVJ7 150 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 TNKS2Q9H2K2 1166 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 ZFYVE28Q9HCC9 887 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 MTMR7Q9Y216 660 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 ZNF652Q9Y2D9 606 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 SNX11Q9Y5W9 270 aa6.09□□□□□ -1.43
CKS1B-201ENST00000308987 ZNF646O15015 1829 aaPredicted RBP6.09□□□□□ -1.44
CKS1B-201ENST00000308987 SZT2Q5T011 3432 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 MAP3K15Q6ZN16 1313 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 A0A1W2PP55 124 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 ERVV-1B6SEH8 477 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 NPIPB6E9PJ23 425 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 APAF1O14727 1248 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 B3GALT4O96024 378 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 GLI1P08151 1106 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 U2AF1L5P0DN76 240 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-201ENST00000308987 LIG1P18858 919 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 ITIH2P19823 946 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 ALDH1B1P30837 517 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 RGS19P49795 217 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 CTSWP56202 376 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 EIF4A1P60842 406 aaKnown RBP6.08□□□□□ -1.44
CKS1B-201ENST00000308987 U2AF1Q01081 240 aaKnown RBP eCLIP6.08□□□□□ -1.44
CKS1B-201ENST00000308987 PROSER3Q2NL68 480 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 MPZL3Q6UWV2 235 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 ZNF34Q8IZ26 560 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 RUNDC1Q96C34 613 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 WDR89Q96FK6 387 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-201ENST00000308987 FANCD2OSQ96PS1 177 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 ATXN3LQ9H3M9 355 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 LIN7BQ9HAP6 207 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 ANO2Q9NQ90 1003 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 DISC1Q9NRI5 854 aa6.08□□□□□ -1.44
CKS1B-201ENST00000308987 ABT1Q9ULW3 272 aaKnown RBP6.08□□□□□ -1.44
CKS1B-201ENST00000308987 RRP7AQ9Y3A4 280 aaKnown RBP6.08□□□□□ -1.44
CKS1B-201ENST00000308987 IBTKQ9P2D0 1353 aaPredicted RBP6.07□□□□□ -1.44
CKS1B-201ENST00000308987 HTATSF1O43719 755 aaKnown RBP6.07□□□□□ -1.44
CKS1B-201ENST00000308987 FAM13AO94988 1023 aa6.07□□□□□ -1.44
CKS1B-201ENST00000308987 ANXA1P04083 346 aa6.07□□□□□ -1.44
CKS1B-201ENST00000308987 CXCL9Q07325 125 aa6.07□□□□□ -1.44
CKS1B-201ENST00000308987 IKZF1Q13422 519 aa6.07□□□□□ -1.44
CKS1B-201ENST00000308987 BECN1Q14457 450 aa6.07□□□□□ -1.44
CKS1B-201ENST00000308987 ASB11Q8WXH4 323 aa6.07□□□□□ -1.44
CKS1B-201ENST00000308987 JDP2Q8WYK2 163 aa6.07□□□□□ -1.44
CKS1B-201ENST00000308987 GPR101Q96P66 508 aaPredicted RBP6.07□□□□□ -1.44
CKS1B-201ENST00000308987 CRAMP1Q96RY5 1269 aa6.07□□□□□ -1.44
CKS1B-201ENST00000308987 PLEKHF1Q96S99 279 aa6.07□□□□□ -1.44
CKS1B-201ENST00000308987 GLIS2Q9BZE0 524 aaPredicted RBP6.07□□□□□ -1.44
CKS1B-201ENST00000308987 SERPINA10Q9UK55 444 aa6.07□□□□□ -1.44
CKS1B-201ENST00000308987 LAS1LQ9Y4W2 734 aaKnown RBP6.07□□□□□ -1.44
CKS1B-201ENST00000308987 KIAA0100Q14667 2235 aaKnown RBP6.06□□□□□ -1.44
CKS1B-201ENST00000308987 ABCC4O15439 1325 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 YDJCA8MPS7 323 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 RNGTTO60942 597 aaKnown RBP6.06□□□□□ -1.44
CKS1B-201ENST00000308987 MYL6BP14649 208 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 GMPSP49915 693 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-201ENST00000308987 EIF6P56537 245 aaKnown RBP6.06□□□□□ -1.44
CKS1B-201ENST00000308987 MAP2K1Q02750 393 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-201ENST00000308987 GRM1Q13255 1194 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 SLC10A5Q5PT55 438 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 USP50Q70EL3 339 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-201ENST00000308987 SAPCD2Q86UD0 394 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 RTF1Q92541 710 aaKnown RBP6.06□□□□□ -1.44
CKS1B-201ENST00000308987 CFAP53Q96M91 514 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 HEXIM2Q96MH2 286 aaKnown RBP6.06□□□□□ -1.44
CKS1B-201ENST00000308987 RTFDC1Q9BY42 306 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-201ENST00000308987 NYXQ9GZU5 481 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 GPRC5DQ9NZD1 345 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 PGAP2Q9UHJ9 254 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 CEP290O15078 2479 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 SPEF2Q9C093 1822 aa6.06□□□□□ -1.44
CKS1B-201ENST00000308987 CCDC85CA6NKD9 419 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 PPIP5K2O43314 1243 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 CELF2O95319 508 aaKnown RBP6.05□□□□□ -1.44
CKS1B-201ENST00000308987 SLFN14P0C7P3 912 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 HCLS1P14317 486 aaPredicted RBP6.05□□□□□ -1.44
CKS1B-201ENST00000308987 RARSP54136 660 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms