RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 LSG1Q9H089 658 aaKnown RBP11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 PCDHB4Q9Y5E5 795 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 HMGCS2P54868 508 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 ITPK1Q13572 414 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 GJA10Q969M2 543 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 ISCA1Q9BUE6 129 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 MXD3Q9BW11 206 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 SEPT10Q9P0V9 454 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 CGNQ9P2M7 1197 aaKnown RBP11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 MTRF1LQ9UGC7 380 aaKnown RBP11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 INPP5FQ9Y2H2 1132 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 LAD1O00515 517 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 PDE6CP51160 858 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 TFAMQ00059 246 aaKnown RBP11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 RSRC2Q7L4I2 434 aaKnown RBP11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 PPM1KQ8N3J5 372 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 NLRC4Q9NPP4 1024 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 USP17L15C9J2P7 530 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 USP17L13C9JLJ4 530 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 USP17L11C9JVI0 530 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 USP17L18D6R9N7 530 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 USP17L22D6RA61 530 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 USP17L17D6RBQ6 530 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 USP17L19D6RCP7 530 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 USP17L20D6RJB6 530 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 GCFC2P16383 781 aaKnown RBP11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 USP17L24Q0WX57 530 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 CLIC6Q96NY7 704 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 SLITRK6Q9H5Y7 841 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 STAP2Q9UGK3 403 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 FBXO41Q8TF61 875 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 MYOZ2Q9NPC6 264 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 POLR3GO15318 223 aaPredicted RBP11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 ANXA13P27216 316 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 RRAGAQ7L523 313 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 CLSTN2Q9H4D0 955 aa11.76□□□□□ -0.53
SYNPO2-201ENST00000307142 RPN1P04843 607 aaKnown RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 XRCC6P12956 609 aaKnown RBP eCLIP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 KIF11P52732 1056 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 RYBPQ8N488 228 aaPredicted RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 ACCSQ96QU6 501 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 ARMCX3Q9UH62 379 aaPredicted RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 ABCB11O95342 1321 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 USP31Q70CQ4 1352 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 SH2B2O14492 632 aaPredicted RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 CCDC26Q8TAB7 109 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 URGCPQ8TCY9 931 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 TTC14Q96N46 770 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 RRAGCQ9HB90 399 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 RNF146Q9NTX7 359 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 CYP21A2P08686 494 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 ADAM9Q13443 819 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 ELMOD1Q8N336 334 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 SLC44A5Q8NCS7 719 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 MAP4K1Q92918 833 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 MRRFQ96E11 262 aaKnown RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 CEP95Q96GE4 821 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 PAXBP1Q9Y5B6 917 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 ATP8B3O60423 1300 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 GOLGA6CA6NDK9 693 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 GOLGA6BA6NDN3 693 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 GOLGA6DP0CG33 693 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 IRX5P78411 483 aaPredicted RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 GBP6Q6ZN66 633 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 CCDC89Q8N998 374 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 GOLGA6AQ9NYA3 693 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 ARHGEF37A1IGU5 675 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 ITIH3Q06033 890 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 DSTYKQ6XUX3 929 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 CATSPER4Q7RTX7 472 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 PCIF1Q9H4Z3 704 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 RPF1Q9H9Y2 349 aaKnown RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 SERPINA10Q9UK55 444 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 CCDC66A2RUB6 948 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 PFKFB1P16118 471 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 STAT1P42224 750 aa11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 COL23A1Q86Y22 540 aaPredicted RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 GPR161Q8N6U8 529 aaKnown RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 PARK7Q99497 189 aaKnown RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 STMN4Q9H169 189 aaPredicted RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 HERC5Q9UII4 1024 aaKnown RBP11.75□□□□□ -0.53
SYNPO2-201ENST00000307142 FANCCQ00597 558 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 MORC3Q14149 939 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 RNF187Q5TA31 235 aaPredicted RBP11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 RCSD1Q6JBY9 416 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 ZNF365Q70YC5 407 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 SPATA33Q96N06 139 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 FOXP1Q9H334 677 aaPredicted RBP11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 PCDHA6Q9UN73 950 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 PCDHA8Q9Y5H6 950 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 CD163L1Q9NR16 1453 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 MYL7Q01449 175 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 NBPF10Q6P3W6 841 aaKnown RBP11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms