RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 GCNT3O95395 438 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 FMNL1O95466 1100 aaPredicted RBP9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 BPIFB4P59827 614 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 CCDC62Q6P9F0 684 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 CCDC24Q8N4L8 307 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 MIPOL1Q8TD10 442 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 MAIP1Q8WWC4 291 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 ZSWIM4Q9H7M6 989 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 PFKFB2O60825 505 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 PTPREP23469 700 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 NEK9Q8TD19 979 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 SLF1Q9BQI6 1058 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 ZSWIM6Q9HCJ5 1215 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 ABCB11O95342 1321 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 HERC4Q5GLZ8 1057 aaPredicted RBP9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 CASC4Q6P4E1 433 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 CCDC68Q9H2F9 335 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 PKD2L1Q9P0L9 805 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 UTP11Q9Y3A2 253 aaKnown RBP9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 TERF1P54274 439 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 UBXN2AP68543 259 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 TTLL4Q14679 1199 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 CHST3Q7LGC8 479 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 PLA2G4DQ86XP0 818 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 TTC39CQ8N584 583 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 GBP7Q8N8V2 638 aaPredicted RBP9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 SDR42E1Q8WUS8 393 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 STAG1Q8WVM7 1258 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 TTLL3Q9Y4R7 772 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 FCER1AP12319 257 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 ATP11AP98196 1134 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 PPP2R5CQ13362 524 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 FAM178BQ8IXR5 827 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 MED10Q9BTT4 135 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 BAG5Q9UL15 447 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 CYP2E1P05181 493 aaPredicted RBP9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 PSAPP07602 524 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 PTPN12Q05209 780 aaKnown RBP9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 PPP2R5DQ14738 602 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 PROSER3Q2NL68 480 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 MARCH10Q8NA82 808 aaPredicted RBP9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 SNX14Q9Y5W7 946 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 TCHHQ07283 1943 aa9.12□□□□□ -0.95
PCDHB1-201ENST00000306549 ASB14A6NK59 587 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 MYL5Q02045 173 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 CTDSPL2Q05D32 466 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 ZNF34Q8IZ26 560 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 SAMD3Q8N6K7 520 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 STK17AQ9UEE5 414 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 TXKP42681 527 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 CEP85LQ5SZL2 805 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 GKAP1Q5VSY0 366 aaPredicted RBP9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 TLR3O15455 904 aaKnown RBP9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 KRT19P08727 400 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 SEPT14Q6ZU15 432 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 BBS5Q8N3I7 341 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 PRPF38AQ8NAV1 312 aaKnown RBP9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 WRNIP1Q96S55 665 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 KATNAL1Q9BW62 490 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 ANO3Q9BYT9 981 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 TMEM206Q9H813 350 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 LMCD1Q9NZU5 365 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 LRFN2Q9ULH4 789 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 TLDC2A0PJX2 215 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 PRDM1O75626 825 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 LIG4P49917 911 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 MAP4K1Q92918 833 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 TBC1D22BQ9NU19 505 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 XRCC5P13010 732 aaKnown RBP9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 XRRA1Q6P2D8 792 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 RSBN1LQ6PCB5 846 aaPredicted RBP9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 UBLCP1Q8WVY7 318 aaPredicted RBP9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 OSBPL5Q9H0X9 879 aaPredicted RBP9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 SLC8A2Q9UPR5 921 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 CAPN9O14815 690 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 SFNP31947 248 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 ZFYVE28Q9HCC9 887 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 PFASO15067 1338 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 EBAG9O00559 213 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 HMGB3O15347 200 aaKnown RBP9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 CHMP2AO43633 222 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 MAP3K21Q5TCX8 1036 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 ARL6IP4Q66PJ3 421 aaKnown RBP9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 SYCE1Q8N0S2 351 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 MCPH1Q8NEM0 835 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 IRAK4Q9NWZ3 460 aa9.11□□□□□ -0.95
PCDHB1-201ENST00000306549 ROBO1Q9Y6N7 1651 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 CEMIPQ8WUJ3 1361 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 CLRN2A0PK11 232 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 CETPP11597 493 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 CDR2Q01850 454 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 ZNF174Q15697 407 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 HLFQ16534 295 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 SLFN12LQ6IEE8 588 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 PALM2Q8IXS6 379 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 SEC31BQ9NQW1 1179 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms