RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 CDC37Q16543 378 aaPredicted RBP11.1□□□□□ -0.63
PRPF8-201ENST00000304992 SH3RF3Q8TEJ3 882 aaPredicted RBP11.1□□□□□ -0.63
PRPF8-201ENST00000304992 LARP4BQ92615 738 aaKnown RBP11.1□□□□□ -0.63
PRPF8-201ENST00000304992 WRNIP1Q96S55 665 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 ZNF215Q9UL58 517 aaPredicted RBP11.1□□□□□ -0.63
PRPF8-201ENST00000304992 ZHX2Q9Y6X8 837 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 LONP1P36776 959 aaKnown RBP11.1□□□□□ -0.63
PRPF8-201ENST00000304992 NAA35Q5VZE5 725 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 OSBP2Q969R2 916 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 KDM5CP41229 1560 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 A6NJR5 290 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 LRRN2O75325 713 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 RPS6KA4O75676 772 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 NSFP46459 744 aaKnown RBP11.1□□□□□ -0.63
PRPF8-201ENST00000304992 CEP85LQ5SZL2 805 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 TBC1D9BQ66K14 1250 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 OR8K1Q8NGG5 319 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 STMN2Q93045 179 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 HINFPQ9BQA5 517 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 PIH1D3Q9NQM4 214 aaKnown RBP11.1□□□□□ -0.63
PRPF8-201ENST00000304992 CRKP46108 304 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 LLGL1Q15334 1064 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 EXOC3L4Q17RC7 722 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 SMIM5Q71RC9 77 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 PHLDB2Q86SQ0 1253 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 DCLK2Q8N568 766 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 ANKRD42Q8N9B4 389 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 FANCLQ9NW38 375 aa11.1□□□□□ -0.63
PRPF8-201ENST00000304992 NR2F2P24468 414 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 RASEFQ8IZ41 740 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 FTOQ9C0B1 505 aaKnown RBP eCLIP11.09□□□□□ -0.637e-6■□□□□ 10.5
PRPF8-201ENST00000304992 BSDC1Q9NW68 430 aaPredicted RBP11.09□□□□□ -0.63
PRPF8-201ENST00000304992 IMPACTQ9P2X3 320 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 I3L4J1 428 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 BNIP3LO60238 219 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 ECE2O60344 883 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 NR5A1Q13285 461 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 ANKRD13CQ8N6S4 541 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 TYW5A2RUC4 315 aaKnown RBP11.09□□□□□ -0.63
PRPF8-201ENST00000304992 GOLGA8SH3BPF8 625 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 H7C0C1 242 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 ATP5OP48047 213 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 UHMK1Q8TAS1 419 aaKnown RBP11.09□□□□□ -0.63
PRPF8-201ENST00000304992 LSG1Q9H089 658 aaKnown RBP11.09□□□□□ -0.63
PRPF8-201ENST00000304992 LMBRD1Q9NUN5 540 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 MTMR6Q9Y217 621 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 KRIT1O00522 736 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 POLR2BP30876 1174 aaKnown RBP11.09□□□□□ -0.63
PRPF8-201ENST00000304992 PTK2Q05397 1052 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 PKP1Q13835 747 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 TTLL11Q8NHH1 800 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 SCYL1Q96KG9 808 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 NACC1Q96RE7 527 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 ZSWIM5Q9P217 1185 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 SARNPP82979 210 aaKnown RBP11.09□□□□□ -0.63
PRPF8-201ENST00000304992 ERCC6LQ2NKX8 1250 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 DENND2CQ68D51 928 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 PARD3BQ8TEW8 1205 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 RILPQ96NA2 401 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 DDIT3P35638 169 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 PTPN21Q16825 1174 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 SCARA5Q6ZMJ2 495 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 MAIP1Q8WWC4 291 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 JPH2Q9BR39 696 aaPredicted RBP11.09□□□□□ -0.63
PRPF8-201ENST00000304992 SLITRK6Q9H5Y7 841 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 MAD1L1Q9Y6D9 718 aa11.09□□□□□ -0.63
PRPF8-201ENST00000304992 KCNQ2O43526 872 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 PTPREP23469 700 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 PTPN12Q05209 780 aaKnown RBP11.08□□□□□ -0.64
PRPF8-201ENST00000304992 CNOT6LQ96LI5 555 aaKnown RBP11.08□□□□□ -0.64
PRPF8-201ENST00000304992 NT5C1BQ96P26 610 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 DPH5Q9H2P9 285 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 DDX41Q9UJV9 622 aaKnown RBP11.08□□□□□ -0.64
PRPF8-201ENST00000304992 SPATA31A3Q5VYP0 1347 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 CD58P19256 250 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 CMA1P23946 247 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 PDZD4Q76G19 769 aaPredicted RBP11.08□□□□□ -0.64
PRPF8-201ENST00000304992 TTC30AQ86WT1 665 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 GRAMD1CQ8IYS0 662 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 AFAP1L1Q8TED9 768 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 PRPF31Q8WWY3 499 aaKnown RBP11.08□□□□□ -0.64
PRPF8-201ENST00000304992 ATP2A3Q93084 1043 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 CACYBPQ9HB71 228 aaKnown RBP11.08□□□□□ -0.64
PRPF8-201ENST00000304992 METTL14Q9HCE5 456 aaKnown RBP11.08□□□□□ -0.64
PRPF8-201ENST00000304992 KIF1BO60333 1816 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 ADGRL3Q9HAR2 1447 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 CYP27B1O15528 508 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 KIF11P52732 1056 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 RPS6KA2Q15349 733 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 ELF2Q15723 593 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 WDR11Q9BZH6 1224 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 CCDC68Q9H2F9 335 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 GPR108Q9NPR9 543 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 ATG3Q9NT62 314 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 TMEM63CQ9P1W3 806 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 BRD1O95696 1058 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 TUBBP07437 444 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 CYP2D6P10635 497 aa11.08□□□□□ -0.64
PRPF8-201ENST00000304992 CLCN1P35523 988 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms