RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 HGSO14964 777 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 MCF2LO15068 1137 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 IRX5P78411 483 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 LRMPQ12912 555 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 CHRNA2Q15822 529 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 TRAPPC3LQ5T215 181 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 G2E3Q7L622 706 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 MRPL11Q9Y3B7 192 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 EFCAB6Q5THR3 1501 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 A0A0D9SFI3 127 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 SCYL3Q8IZE3 742 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 PDCD7Q8N8D1 485 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 GFM2Q969S9 779 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 TMEM60Q9H2L4 133 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 XAB2Q9HCS7 855 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 PKD2L1Q9P0L9 805 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 HSPD1P10809 573 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 KMT5BQ4FZB7 885 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 NELFCDQ8IXH7 590 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 PCDHA12Q9UN75 941 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 SCINQ9Y6U3 715 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 CPSF1Q10570 1443 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 SPECC1L-ADORA2AF8WAN1 911 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 SERPING1P05155 500 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 LIG4P49917 911 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 NNTQ13423 1086 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 SLC35F6Q8N357 371 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 NACA2Q9H009 215 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 ZNF219Q9P2Y4 722 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 ASPRV1Q53RT3 343 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 HELBQ8NG08 1087 aaPredicted RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 LARP4BQ92615 738 aaKnown RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 N4BP2L2Q92802 583 aaPredicted RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 NCAPD2Q15021 1401 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 AFPP02771 609 aaKnown RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 CLCN6P51797 869 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 POLR2FP61218 127 aaKnown RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 RASSF7Q02833 373 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 SCRN1Q12765 414 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 ADGRL3Q9HAR2 1447 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 MRPL47Q9HD33 250 aaKnown RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 CCDC188H7C350 402 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 PNMA6AP0CW24 399 aaPredicted RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 ACTN1P12814 892 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 PTK2Q05397 1052 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 TADA2BQ86TJ2 420 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 SH3GLB2Q9NR46 395 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 PCDHA4Q9UN74 947 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 NOC2LQ9Y3T9 749 aaKnown RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 GRID2IPA4D2P6 1211 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 MED7O43513 233 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 KRT19P08727 400 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 ZBED6P86452 979 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 PPP2R5DQ14738 602 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 SGO2Q562F6 1265 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 P2RX5Q93086 422 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 MYL10Q9BUA6 226 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 MAP2P11137 1827 aaKnown RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 KIAA1210Q9ULL0 1709 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 PEX19P40855 299 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 ECE1P42892 770 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 MSH2P43246 934 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 CUL4AQ13619 759 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 TNFAIP1Q13829 316 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 UBE3CQ15386 1083 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 FAM26FQ5R3K3 315 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 TTC25Q96NG3 672 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 ZMYND12Q9H0C1 365 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 SLC5A4Q9NY91 659 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 GCNT4Q9P109 453 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 GCP02774 474 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 TAF11Q15544 211 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
SF3B3-201ENST00000302516 DTNBP1Q96EV8 351 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 TEKT3Q9BXF9 490 aa8.29□□□□□ -1.08
SF3B3-201ENST00000302516 IQANK1A0A1B0GTG1 560 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 CPP00450 1065 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 DHX9Q08211 1270 aaKnown RBP8.28□□□□□ -1.08
SF3B3-201ENST00000302516 OLFM3Q96PB7 478 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 PYCARDQ9ULZ3 195 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 DISP1Q96F81 1524 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 POLR2MP0CAP2 368 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 PDIA3P30101 505 aaKnown RBP8.28□□□□□ -1.08
SF3B3-201ENST00000302516 PSMC2P35998 433 aaKnown RBP8.28□□□□□ -1.08
SF3B3-201ENST00000302516 YWHAGP61981 247 aaKnown RBP eCLIP8.28□□□□□ -1.08
SF3B3-201ENST00000302516 SP4Q02446 784 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 FAM102BQ5T8I3 360 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 MAP4K1Q92918 833 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 FAM89AQ96GI7 184 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 BIN2Q9UBW5 565 aaPredicted RBP8.28□□□□□ -1.08
SF3B3-201ENST00000302516 WDR19Q8NEZ3 1342 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 YARSP54577 528 aaKnown RBP8.28□□□□□ -1.08
SF3B3-201ENST00000302516 DR1Q01658 176 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 PTGDRQ13258 359 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 CASP8Q14790 479 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 ARL6IP4Q66PJ3 421 aaKnown RBP8.28□□□□□ -1.08
SF3B3-201ENST00000302516 ENOX1Q8TC92 643 aaKnown RBP8.28□□□□□ -1.08
SF3B3-201ENST00000302516 ANAPC5Q9UJX4 755 aa8.28□□□□□ -1.08
SF3B3-201ENST00000302516 TARSL2A2RTX5 802 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms