RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ZNF536O15090 1300 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 A0A087WWV3 80 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 PP2D1A8MPX8 630 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 PRR29P0C7W0 189 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 POTEIP0CG38 1075 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 POTEJP0CG39 1038 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 AFMP43652 599 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 SARSP49591 514 aaKnown RBP17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 IQCB1Q15051 598 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 PDXDC2PQ6P474 469 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 FCHSD1Q86WN1 690 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 SLFN12Q8IYM2 578 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 GRAMD1CQ8IYS0 662 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 SPATA20Q8TB22 786 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 PDLIM2Q96JY6 352 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 P2RX7Q99572 595 aaKnown RBP17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 TTC12Q9H892 705 aaPredicted RBP17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 RRAGCQ9HB90 399 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 SNCAIPQ9Y6H5 919 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 CYP3A4P08684 503 aa17.72■□□□□ 0.43
HERPUD1-201ENST00000300302 SAMD3Q8N6K7 520 aa17.72■□□□□ 0.43
HERPUD1-201ENST00000300302 CDCA5Q96FF9 252 aa17.72■□□□□ 0.43
HERPUD1-201ENST00000300302 CALML4Q96GE6 196 aa17.72■□□□□ 0.43
HERPUD1-201ENST00000300302 MAGEF1Q9HAY2 307 aa17.72■□□□□ 0.43
HERPUD1-201ENST00000300302 PCDHA12Q9UN75 941 aa17.72■□□□□ 0.43
HERPUD1-201ENST00000300302 TBX3O15119 743 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 CIITAP33076 1130 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 PLCB2Q00722 1185 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 Q4G0T1 1027 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 SH3D19Q5HYK7 790 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 ISM2Q6H9L7 571 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 CPXCR1Q8N123 301 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 HAS1Q92839 578 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 GSDMAQ96QA5 445 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 DACH1Q9UI36 760 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 MAN1B1Q9UKM7 699 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 CLEC11AQ9Y240 323 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 VWA5AO00534 786 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 MYL1P05976 194 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 ZNF76P36508 570 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 DPYDQ12882 1025 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 COG2Q14746 738 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 ANKRD13AQ8IZ07 590 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 TRIM44Q96DX7 344 aaPredicted RBP17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 RAVER2Q9HCJ3 691 aaKnown RBP17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 KCNMB3Q9NPA1 279 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 MAP3K20Q9NYL2 800 aaKnown RBP17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 RABGAP1Q9Y3P9 1069 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 WDR90Q96KV7 1748 aa17.71■□□□□ 0.43
HERPUD1-201ENST00000300302 GTPBP6O43824 516 aaPredicted RBP17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 ALAS1P13196 640 aa17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 HSD17B4P51659 736 aa17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 OAZ1P54368 228 aa17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 PRR16Q569H4 304 aa17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 KRT79Q5XKE5 535 aa17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 DHX40Q8IX18 779 aaKnown RBP17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 MLKLQ8NB16 471 aa17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 ZNF526Q8TF50 670 aaPredicted RBP17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 TBC1D5Q92609 795 aa17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 PAPPA2Q9BXP8 1791 aa17.7■□□□□ 0.42
HERPUD1-201ENST00000300302 SMTNL1A8MU46 457 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 ADCY5O95622 1261 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 TPM4P67936 248 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 MORC3Q14149 939 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 TTLL12Q14166 644 aaPredicted RBP17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 CATSPERGQ6ZRH7 1159 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 AOPEPQ8N6M6 819 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 ATG4CQ96DT6 458 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 CDK5RAP3Q96JB5 506 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 PARP14Q460N5 1801 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 PLCG1P19174 1290 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 DSG3P32926 999 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 GHRHRQ02643 423 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 PPATQ06203 517 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 MYPNQ86TC9 1320 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 CLEC4DQ8WXI8 215 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 FAM20AQ96MK3 541 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 OTOFQ9HC10 1997 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 HOXC10Q9NYD6 342 aa17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.69■□□□□ 0.42
HERPUD1-201ENST00000300302 POTEMA6NI47 508 aa17.68■□□□□ 0.42
HERPUD1-201ENST00000300302 MMTAG2Q9BU76 263 aaKnown RBP17.68■□□□□ 0.42
HERPUD1-201ENST00000300302 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
HERPUD1-201ENST00000300302 STK17AQ9UEE5 414 aa17.68■□□□□ 0.42
HERPUD1-201ENST00000300302 ADAMTS5Q9UNA0 930 aa17.68■□□□□ 0.42
HERPUD1-201ENST00000300302 FAM86B1E9PN63 330 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 NFIBO00712 420 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 IKBKBO14920 756 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 SLC26A4O43511 780 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 FAM86B2P0C5J1 330 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 MAP1SQ66K74 1059 aaPredicted RBP17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 ARMC9Q7Z3E5 817 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 ERO1BQ86YB8 467 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 ETNPPLQ8TBG4 499 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 SNX29Q8TEQ0 813 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 STAMQ92783 540 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 PLIN2Q99541 437 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 ELP3Q9H9T3 547 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms