RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 LDHDQ86WU2 507 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 GSDMAQ96QA5 445 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 KCNF1Q9H3M0 494 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 FANCLQ9NW38 375 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 IFNKQ9P0W0 207 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 FEM1BQ9UK73 627 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 CDC25BP30305 580 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 BACE1P56817 501 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 CABP7Q86V35 215 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 TRMT44Q8IYL2 757 aaKnown RBP15.97■□□□□ 0.15
CDH16-201ENST00000299752 SMYD4Q8IYR2 804 aaPredicted RBP15.97■□□□□ 0.15
CDH16-201ENST00000299752 HOOK2Q96ED9 719 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 AK8Q96MA6 479 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 ELP3Q9H9T3 547 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 DACH1Q9UI36 760 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 CCPG1Q9ULG6 757 aa15.97■□□□□ 0.15
CDH16-201ENST00000299752 DOCK1Q14185 1865 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 HSP90AA4PQ58FG1 418 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 MAP1SQ66K74 1059 aaPredicted RBP15.96■□□□□ 0.15
CDH16-201ENST00000299752 SLF1Q9BQI6 1058 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 XPO4Q9C0E2 1151 aaKnown RBP15.96■□□□□ 0.15
CDH16-201ENST00000299752 GLT8D2Q9H1C3 349 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 POTECB2RU33 542 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 TRAF5O00463 557 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 ALAS1P13196 640 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 CCDC144BQ3MJ40 725 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.96■□□□□ 0.15
CDH16-201ENST00000299752 LRRC15Q8TF66 581 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 ATG4CQ96DT6 458 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 CDCA5Q96FF9 252 aa15.96■□□□□ 0.15
CDH16-201ENST00000299752 RANBP17Q9H2T7 1088 aaKnown RBP15.96■□□□□ 0.15
CDH16-201ENST00000299752 DDX25Q9UHL0 483 aaKnown RBP15.96■□□□□ 0.15
CDH16-201ENST00000299752 WDR46O15213 610 aaKnown RBP15.96■□□□□ 0.14
CDH16-201ENST00000299752 GTPBP6O43824 516 aaPredicted RBP15.96■□□□□ 0.14
CDH16-201ENST00000299752 MARCH6O60337 910 aa15.96■□□□□ 0.14
CDH16-201ENST00000299752 PPP4R3AQ6IN85 833 aa15.96■□□□□ 0.14
CDH16-201ENST00000299752 KLHL10Q6JEL2 608 aa15.96■□□□□ 0.14
CDH16-201ENST00000299752 IGSF22Q8N9C0 903 aa15.96■□□□□ 0.14
CDH16-201ENST00000299752 CYP2W1Q8TAV3 490 aa15.96■□□□□ 0.14
CDH16-201ENST00000299752 TAF1DQ9H5J8 278 aaPredicted RBP15.96■□□□□ 0.14
CDH16-201ENST00000299752 PCNTO95613 3336 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 POTEMA6NI47 508 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 SPDYE3A6NKU9 549 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 TPM3P06753 285 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 CD44P16070 742 aaKnown RBP15.95■□□□□ 0.14
CDH16-201ENST00000299752 PLCG1P19174 1290 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 FANCCQ00597 558 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 OTUD5Q96G74 571 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 SNCAIPQ9Y6H5 919 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 NFIBO00712 420 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 ZNF500O60304 480 aaPredicted RBP15.95■□□□□ 0.14
CDH16-201ENST00000299752 DHX8Q14562 1220 aaKnown RBP15.95■□□□□ 0.14
CDH16-201ENST00000299752 FILIP1Q7Z7B0 1213 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 FAM160B2Q86V87 743 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 PRPF38AQ8NAV1 312 aaKnown RBP15.95■□□□□ 0.14
CDH16-201ENST00000299752 MED15Q96RN5 788 aa15.95■□□□□ 0.14
CDH16-201ENST00000299752 ZNF536O15090 1300 aa15.94■□□□□ 0.14
CDH16-201ENST00000299752 PPP1R12BO60237 982 aaPredicted RBP15.94■□□□□ 0.14
CDH16-201ENST00000299752 MMTAG2Q9BU76 263 aaKnown RBP15.94■□□□□ 0.14
CDH16-201ENST00000299752 LRWD1Q9UFC0 647 aa15.94■□□□□ 0.14
CDH16-201ENST00000299752 NFE2L3Q9Y4A8 694 aa15.94■□□□□ 0.14
CDH16-201ENST00000299752 CTDP1Q9Y5B0 961 aaPredicted RBP15.94■□□□□ 0.14
CDH16-201ENST00000299752 TMEM266Q2M3C6 531 aa15.94■□□□□ 0.14
CDH16-201ENST00000299752 PRR16Q569H4 304 aa15.94■□□□□ 0.14
CDH16-201ENST00000299752 LPAR1Q92633 364 aa15.94■□□□□ 0.14
CDH16-201ENST00000299752 PURBQ96QR8 312 aaKnown RBP15.94■□□□□ 0.14
CDH16-201ENST00000299752 AS3MTQ9HBK9 375 aa15.94■□□□□ 0.14
CDH16-201ENST00000299752 PPP2R3BQ9Y5P8 575 aa15.94■□□□□ 0.14
CDH16-201ENST00000299752 PITPNM2Q9BZ72 1349 aa15.94■□□□□ 0.14
CDH16-201ENST00000299752 GRIN3BO60391 1043 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 SERPINC1P01008 464 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 MAP3K9P80192 1104 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 ARHGAP4P98171 946 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 LRMPQ12912 555 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 MUM1L1Q5H9M0 696 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 ENOX1Q8TC92 643 aaKnown RBP15.93■□□□□ 0.14
CDH16-201ENST00000299752 L3MBTL3Q96JM7 780 aaPredicted RBP15.93■□□□□ 0.14
CDH16-201ENST00000299752 RPN1P04843 607 aaKnown RBP15.93■□□□□ 0.14
CDH16-201ENST00000299752 FXR2P51116 673 aaKnown RBP eCLIP15.93■□□□□ 0.14
CDH16-201ENST00000299752 STX17P56962 302 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 C17orf53Q8N3J3 647 aaPredicted RBP15.93■□□□□ 0.14
CDH16-201ENST00000299752 HAS1Q92839 578 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 CSADQ9Y600 493 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 ERCC5P28715 1186 aaPredicted RBP15.93■□□□□ 0.14
CDH16-201ENST00000299752 MKRN3Q13064 507 aaKnown RBP15.93■□□□□ 0.14
CDH16-201ENST00000299752 AP3B2Q13367 1082 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 PLS1Q14651 629 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 USP50Q70EL3 339 aaPredicted RBP15.93■□□□□ 0.14
CDH16-201ENST00000299752 KBTBD4Q9NVX7 518 aa15.93■□□□□ 0.14
CDH16-201ENST00000299752 PPP1R3GB7ZBB8 358 aa15.92■□□□□ 0.14
CDH16-201ENST00000299752 GCFC2P16383 781 aaKnown RBP15.92■□□□□ 0.14
CDH16-201ENST00000299752 UBASH3AP57075 661 aa15.92■□□□□ 0.14
CDH16-201ENST00000299752 ARID5BQ14865 1188 aa15.92■□□□□ 0.14
CDH16-201ENST00000299752 TREML2Q5T2D2 321 aa15.92■□□□□ 0.14
CDH16-201ENST00000299752 CALML4Q96GE6 196 aa15.92■□□□□ 0.14
CDH16-201ENST00000299752 WDR18Q9BV38 432 aa15.92■□□□□ 0.14
CDH16-201ENST00000299752 PPP1R9AQ9ULJ8 1098 aa15.92■□□□□ 0.14
CDH16-201ENST00000299752 PYCARDQ9ULZ3 195 aa15.92■□□□□ 0.14
CDH16-201ENST00000299752 AFG3L2Q9Y4W6 797 aa15.92■□□□□ 0.14
CDH16-201ENST00000299752 RIPK3Q9Y572 518 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms