RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 WHAMMP3Q1A5X7 153 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 CCDC40Q4G0X9 1142 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 DUSP9Q99956 384 aaKnown RBP15.16■□□□□ 0.02
CDH8-201ENST00000299345 FAM207AQ9NSI2 230 aaPredicted RBP15.16■□□□□ 0.02
CDH8-201ENST00000299345 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 MYMKA6NI61 221 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 KIF5AQ12840 1032 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 DBNDD1Q9H9R9 158 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 BTAF1O14981 1849 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 PVALEFA0A1B0GWK0 134 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 GRB10Q13322 594 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 KRT27Q7Z3Y8 459 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 RIC8AQ9NPQ8 531 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 AGPAT5Q9NUQ2 364 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 ZBTB5O15062 677 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 AKR1B10O60218 316 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 USO1O60763 962 aaKnown RBP15.15■□□□□ 0.02
CDH8-201ENST00000299345 FXR2P51116 673 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDH8-201ENST00000299345 PDIA5Q14554 519 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 CDC42EP5Q6NZY7 148 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 CC2D1AQ6P1N0 951 aaPredicted RBP15.15■□□□□ 0.02
CDH8-201ENST00000299345 PDE6BP35913 854 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 CACNB3P54284 484 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 BRD3Q15059 726 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 LRRC41Q15345 812 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 PPP1R18Q6NYC8 613 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 RSRC2Q7L4I2 434 aaKnown RBP15.15■□□□□ 0.02
CDH8-201ENST00000299345 DDX12PQ92771 950 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 NAP1L4Q99733 375 aaKnown RBP15.15■□□□□ 0.02
CDH8-201ENST00000299345 MMTAG2Q9BU76 263 aaKnown RBP15.15■□□□□ 0.02
CDH8-201ENST00000299345 GBP3Q9H0R5 595 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 GLT8D2Q9H1C3 349 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 PCDHA1Q9Y5I3 950 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 FHOD1Q9Y613 1164 aa15.15■□□□□ 0.02
CDH8-201ENST00000299345 TRAF5O00463 557 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 ATP8B1O43520 1251 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 EPS15P42566 896 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
CDH8-201ENST00000299345 CERS5Q8N5B7 392 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 RAD54LQ92698 747 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
CDH8-201ENST00000299345 FAM196BA6NMK8 535 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 ENC1O14682 589 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 CERKLQ49MI3 558 aaPredicted RBP15.14■□□□□ 0.01
CDH8-201ENST00000299345 ZNF507Q8TCN5 953 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 DNAJC7Q99615 494 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 ST7Q9NRC1 585 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 MACROD2A1Z1Q3 448 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 CCDC151A5D8V7 595 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 GCFC2P16383 781 aaKnown RBP15.14■□□□□ 0.01
CDH8-201ENST00000299345 CRKP46108 304 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 NAP1L1P55209 391 aaKnown RBP15.14■□□□□ 0.01
CDH8-201ENST00000299345 GABPAQ06546 454 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 SLFN13Q68D06 897 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 MYOCDQ8IZQ8 938 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 LRRC15Q8TF66 581 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 MTMR9Q96QG7 549 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 NHEJ1Q9H9Q4 299 aaPredicted RBP15.14■□□□□ 0.01
CDH8-201ENST00000299345 JADE2Q9NQC1 790 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 TBC1D7Q9P0N9 293 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 TRIM10Q9UDY6 481 aa15.14■□□□□ 0.01
CDH8-201ENST00000299345 FECHP22830 423 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 KLK7P49862 253 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 C2CD5Q86YS7 1000 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 PKNOX2Q96KN3 472 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 NT5C3AQ9H0P0 336 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 NDST4Q9H3R1 872 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 KIF20AO95235 890 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 ABL1P00519 1130 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 TERF2Q15554 542 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 CCDC65Q8IXS2 484 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 GUF1Q8N442 669 aaKnown RBP15.13■□□□□ 0.01
CDH8-201ENST00000299345 KIAA0895Q8NCT3 520 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 CAPZA3Q96KX2 299 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 ZNF831Q5JPB2 1677 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 USP17L15C9J2P7 530 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 USP17L13C9JLJ4 530 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 USP17L11C9JVI0 530 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 USP17L18D6R9N7 530 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 USP17L22D6RA61 530 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 USP17L17D6RBQ6 530 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 USP17L19D6RCP7 530 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 USP17L20D6RJB6 530 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 SHMT1P34896 483 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 CYP27A1Q02318 531 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 USP17L24Q0WX57 530 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 NFIAQ12857 509 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 VWA3BQ502W6 1294 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 TDRD12Q587J7 1177 aaKnown RBP15.13■□□□□ 0.01
CDH8-201ENST00000299345 CCDC70Q6NSX1 233 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 USP17L6PQ6QN14 398 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 HHIPL2Q6UWX4 724 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 GPIHBP1Q8IV16 184 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 NEK11Q8NG66 645 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 IQCDQ96DY2 449 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 BLOC1S4Q9NUP1 217 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 SAR1BQ9Y6B6 198 aa15.13■□□□□ 0.01
CDH8-201ENST00000299345 RAD51AP2Q09MP3 1159 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 MAN2A1Q16706 1144 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 LONRF2Q1L5Z9 754 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms