RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ZCCHC17Q9NP64 241 aaKnown RBP6.89□□□□□ -1.31
SSX3-201ENST00000298396 PDRG1Q9NUG6 133 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 TMOD4Q9NZQ9 345 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 BTBD7Q9P203 1132 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 CDV3Q9UKY7 258 aaKnown RBP6.89□□□□□ -1.31
SSX3-201ENST00000298396 TPCN1Q9ULQ1 816 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 FRMPD3Q5JV73 1810 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 ZNF536O15090 1300 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 CNTNAP5Q8WYK1 1306 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 CA12O43570 354 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 PLA2G6O60733 806 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 EIF5BO60841 1220 aaKnown RBP6.88□□□□□ -1.31
SSX3-201ENST00000298396 TRPA1O75762 1119 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 FLOT1O75955 427 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 DDAH1O94760 285 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 TBC1D8O95759 1140 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 BCRP11274 1271 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 PDIA3P30101 505 aaKnown RBP6.88□□□□□ -1.31
SSX3-201ENST00000298396 SLC16A2P36021 539 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 SLC1A4P43007 532 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 NEK4P51957 841 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 INHBEP58166 350 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 HERVK_113P62684 666 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 SART3Q15020 963 aaKnown RBP6.88□□□□□ -1.31
SSX3-201ENST00000298396 TAF1CQ15572 869 aaPredicted RBP6.88□□□□□ -1.31
SSX3-201ENST00000298396 CCDC96Q2M329 555 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 LBX2Q6XYB7 198 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 MICU3Q86XE3 530 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 CMTR1Q8N1G2 835 aaKnown RBP6.88□□□□□ -1.31
SSX3-201ENST00000298396 SRBD1Q8N5C6 995 aaKnown RBP6.88□□□□□ -1.31
SSX3-201ENST00000298396 MTMR8Q96EF0 704 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 MRGPRX2Q96LB1 330 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 UBA5Q9GZZ9 404 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 NCOA5Q9HCD5 579 aaKnown RBP6.88□□□□□ -1.31
SSX3-201ENST00000298396 RBPJLQ9UBG7 517 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 PPP1R9AQ9ULJ8 1098 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 TCHHQ07283 1943 aa6.88□□□□□ -1.31
SSX3-201ENST00000298396 MYPNQ86TC9 1320 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 ERICH2A1L162 156 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 CCDC69A6NI79 296 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 GOLGA8BA8MQT2 603 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 VWA5AO00534 786 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 FOXN1O15353 648 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 TLR2O60603 784 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 PPP1R11O60927 126 aaPredicted RBP6.87□□□□□ -1.31
SSX3-201ENST00000298396 CTDNEP1O95476 244 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 PARP1P09874 1014 aaKnown RBP6.87□□□□□ -1.31
SSX3-201ENST00000298396 ADD1P35611 737 aaKnown RBP6.87□□□□□ -1.31
SSX3-201ENST00000298396 IRX3P78415 501 aaPredicted RBP6.87□□□□□ -1.31
SSX3-201ENST00000298396 COG2Q14746 738 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 TMEM132BQ14DG7 1078 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 RABEP1Q15276 862 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 NTRK3Q16288 839 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 ME3Q16798 604 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 ASPRV1Q53RT3 343 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 SYDE2Q5VT97 1194 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 C17orf99Q6UX52 265 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 NFXL1Q6ZNB6 911 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 TMTC3Q6ZXV5 915 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 NOL8Q76FK4 1167 aaKnown RBP6.87□□□□□ -1.31
SSX3-201ENST00000298396 CATIPQ7Z7H3 387 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 ZBTB33Q86T24 672 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 PHTF2Q8N3S3 785 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 FANCBQ8NB91 859 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 EHBP1Q8NDI1 1231 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 NUP133Q8WUM0 1156 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 SHISA4Q96DD7 197 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 PARK7Q99497 189 aaKnown RBP6.87□□□□□ -1.31
SSX3-201ENST00000298396 MAP3K14Q99558 947 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 SLF1Q9BQI6 1058 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 ARHGAP39Q9C0H5 1083 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 RANBP17Q9H2T7 1088 aaKnown RBP6.87□□□□□ -1.31
SSX3-201ENST00000298396 JMJD4Q9H9V9 463 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 SLC38A10Q9HBR0 1119 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 TOR4AQ9NXH8 423 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 SAGE1Q9NXZ1 904 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 CPA4Q9UI42 421 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 FEM1BQ9UK73 627 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 ZNF214Q9UL59 606 aaPredicted RBP6.87□□□□□ -1.31
SSX3-201ENST00000298396 PRR12Q9ULL5 1215 aa6.87□□□□□ -1.31
SSX3-201ENST00000298396 hCG_1642624A0A1W2PR95 340 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 GOLGA8AA7E2F4 631 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 KLRF2D3W0D1 207 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 ZBTB43O43298 467 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 PFKFB2O60825 505 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 PPFIA3O75145 1194 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 HSPA8P11142 646 aaKnown RBP6.86□□□□□ -1.31
SSX3-201ENST00000298396 STAT2P52630 851 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 RCAN1P53805 252 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 ERVK-9P63128 1117 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 ERVK-24P63145 666 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 CCT2P78371 535 aaKnown RBP6.86□□□□□ -1.31
SSX3-201ENST00000298396 SCRN1Q12765 414 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 STK3Q13188 491 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 GPATCH4Q5T3I0 446 aaKnown RBP6.86□□□□□ -1.31
SSX3-201ENST00000298396 FAM160B2Q86V87 743 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 ADGRF4Q8IZF3 695 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 TMTC2Q8N394 836 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 ANKRD13CQ8N6S4 541 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 NECAB1Q8N987 351 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms