RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 RABGAP1Q9Y3P9 1069 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 PDHXO00330 501 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 NEMFO60524 1076 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 SNW1Q13573 536 aaKnown RBP27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 RESP18Q5W5W9 173 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 CAVIN1Q6NZI2 390 aaKnown RBP27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 CHST13Q8NET6 341 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 MTMR9Q96QG7 549 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 TXNRD2Q9NNW7 524 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 SLC37A4O43826 429 aa27.96■■■□□ 2.07
GTF2A1-201ENST00000298173 RNF207Q6ZRF8 634 aa27.96■■■□□ 2.07
GTF2A1-201ENST00000298173 FSIP1Q8NA03 581 aa27.96■■■□□ 2.07
GTF2A1-201ENST00000298173 ACAD9Q9H845 621 aa27.96■■■□□ 2.07
GTF2A1-201ENST00000298173 RPTORQ8N122 1335 aa27.96■■■□□ 2.07
GTF2A1-201ENST00000298173 FAM43AQ8N2R8 423 aa27.95■■■□□ 2.07
GTF2A1-201ENST00000298173 GTF3C2Q8WUA4 911 aaPredicted RBP27.95■■■□□ 2.07
GTF2A1-201ENST00000298173 CSRNP2Q9H175 543 aa27.95■■■□□ 2.07
GTF2A1-201ENST00000298173 HPSEQ9Y251 543 aa27.95■■■□□ 2.07
GTF2A1-201ENST00000298173 A0A1B0GVL5 298 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 NR1I2O75469 434 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 SLC10A3P09131 477 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 CYP2C8P10632 490 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 Q3C1V9 767 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 POTEDQ86YR6 584 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 DDX25Q9UHL0 483 aaKnown RBP27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 FRMPD4Q14CM0 1322 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 TMEM88BA6NKF7 163 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 OR52Z1P0C646 297 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 FAM160A1Q05DH4 1040 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 FSTL1Q12841 308 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 BAATQ14032 418 aaPredicted RBP27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 SLC30A10Q6XR72 485 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 FMR1NBQ8N0W7 255 aaPredicted RBP27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 HHIPL1Q96JK4 782 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 MOV10L1Q9BXT6 1211 aaKnown RBP27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 EHMT1Q9H9B1 1298 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 DACT1Q9NYF0 836 aa27.94■■■□□ 2.06
GTF2A1-201ENST00000298173 FAM155AB1AL88 458 aaPredicted RBP27.93■■■□□ 2.06
GTF2A1-201ENST00000298173 NDUFA8P51970 172 aa27.93■■■□□ 2.06
GTF2A1-201ENST00000298173 Q4G0T1 1027 aa27.93■■■□□ 2.06
GTF2A1-201ENST00000298173 NSMFQ6X4W1 530 aa27.93■■■□□ 2.06
GTF2A1-201ENST00000298173 PAGR1Q9BTK6 254 aa27.93■■■□□ 2.06
GTF2A1-201ENST00000298173 VWA3AA6NCI4 1184 aa27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 MANSC4A6NHS7 340 aaPredicted RBP27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 FAM86B1E9PN63 330 aa27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 FAM86B2P0C5J1 330 aa27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 SPECC1Q5M775 1068 aa27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 DTHD1Q6ZMT9 781 aa27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 LENG9Q96B70 501 aa27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 TAAR1Q96RJ0 339 aa27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 ANP32EQ9BTT0 268 aa27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 A1CFQ9NQ94 594 aaKnown RBP27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 CYP39A1Q9NYL5 469 aa27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 FBXO40Q9UH90 709 aa27.92■■■□□ 2.06
GTF2A1-201ENST00000298173 SLC25A27O95847 323 aa27.91■■■□□ 2.06
GTF2A1-201ENST00000298173 PFKFB1P16118 471 aa27.91■■■□□ 2.06
GTF2A1-201ENST00000298173 CALCRLQ16602 461 aa27.91■■■□□ 2.06
GTF2A1-201ENST00000298173 CCDC73Q6ZRK6 1079 aa27.91■■■□□ 2.06
GTF2A1-201ENST00000298173 HAS1Q92839 578 aa27.91■■■□□ 2.06
GTF2A1-201ENST00000298173 LONP1P36776 959 aaKnown RBP27.91■■■□□ 2.06
GTF2A1-201ENST00000298173 USP49Q70CQ1 688 aa27.91■■■□□ 2.06
GTF2A1-201ENST00000298173 ZNF784Q8NCA9 323 aaPredicted RBP27.91■■■□□ 2.06
GTF2A1-201ENST00000298173 CCDC102AQ96A19 550 aa27.91■■■□□ 2.06
GTF2A1-201ENST00000298173 KCNMB3Q9NPA1 279 aa27.91■■■□□ 2.06
GTF2A1-201ENST00000298173 SYAP1Q96A49 352 aaPredicted RBP27.9■■■□□ 2.06
GTF2A1-201ENST00000298173 GZF1Q9H116 711 aaPredicted RBP27.9■■■□□ 2.06
GTF2A1-201ENST00000298173 DDX19AQ9NUU7 478 aaKnown RBP27.9■■■□□ 2.06
GTF2A1-201ENST00000298173 LCTP09848 1927 aa27.89■■■□□ 2.06
GTF2A1-201ENST00000298173 IGLV3-22A0A075B6J6 115 aa27.89■■■□□ 2.06
GTF2A1-201ENST00000298173 ERCC3P19447 782 aa27.89■■■□□ 2.06
GTF2A1-201ENST00000298173 YY1P25490 414 aa27.89■■■□□ 2.06
GTF2A1-201ENST00000298173 COPB2P35606 906 aa27.89■■■□□ 2.06
GTF2A1-201ENST00000298173 ERVK-9P63128 1117 aa27.89■■■□□ 2.06
GTF2A1-201ENST00000298173 ERVK-24P63145 666 aa27.89■■■□□ 2.06
GTF2A1-201ENST00000298173 R3HDMLQ9H3Y0 253 aa27.89■■■□□ 2.06
GTF2A1-201ENST00000298173 ZCCHC17Q9NP64 241 aaKnown RBP27.89■■■□□ 2.06
GTF2A1-201ENST00000298173 ABT1Q9ULW3 272 aaKnown RBP27.89■■■□□ 2.06
GTF2A1-201ENST00000298173 GCLCP48506 637 aaPredicted RBP27.88■■■□□ 2.05
GTF2A1-201ENST00000298173 INHBEP58166 350 aa27.88■■■□□ 2.05
GTF2A1-201ENST00000298173 UBXN2AP68543 259 aa27.88■■■□□ 2.05
GTF2A1-201ENST00000298173 CCDC183Q5T5S1 534 aa27.88■■■□□ 2.05
GTF2A1-201ENST00000298173 CYP2W1Q8TAV3 490 aa27.88■■■□□ 2.05
GTF2A1-201ENST00000298173 SMCR8Q8TEV9 937 aaPredicted RBP27.88■■■□□ 2.05
GTF2A1-201ENST00000298173 EPSTI1Q96J88 318 aa27.88■■■□□ 2.05
GTF2A1-201ENST00000298173 PURBQ96QR8 312 aaKnown RBP27.88■■■□□ 2.05
GTF2A1-201ENST00000298173 TBX3O15119 743 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 NCAPG2Q86XI2 1143 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 SHCBP1Q8NEM2 672 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 RMDN3Q96TC7 470 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 PXMP2Q9NR77 195 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 FAM13BQ9NYF5 915 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 MORF4L1Q9UBU8 362 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 KCNH3Q9ULD8 1083 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 IGF2BP3O00425 579 aaKnown RBP eCLIP27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 ZNF202O95125 648 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 FXR2P51116 673 aaKnown RBP eCLIP27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 PRR16Q569H4 304 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 PCNX4Q63HM2 1172 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 IGSF22Q8N9C0 903 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms