RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.93□□□□□ -0.18
HMGB2-201ENST00000296503 DNM1LO00429 736 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 DUSP11O75319 330 aaKnown RBP13.93□□□□□ -0.18
HMGB2-201ENST00000296503 CCT2P78371 535 aaKnown RBP13.93□□□□□ -0.18
HMGB2-201ENST00000296503 TOB2Q14106 344 aaPredicted RBP13.93□□□□□ -0.18
HMGB2-201ENST00000296503 LRRC41Q15345 812 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 TAPT1Q6NXT6 567 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 HEATR3Q7Z4Q2 680 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 CUL5Q93034 780 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 EIF2AK2P19525 551 aaKnown RBP13.92□□□□□ -0.18
HMGB2-201ENST00000296503 PDIA3P30101 505 aaKnown RBP13.92□□□□□ -0.18
HMGB2-201ENST00000296503 STXBP2Q15833 593 aa13.92□□□□□ -0.18
HMGB2-201ENST00000296503 IWS1Q96ST2 819 aa13.92□□□□□ -0.18
HMGB2-201ENST00000296503 PDE4DIPQ5VU43 2346 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 C6orf222P0C671 652 aaPredicted RBP13.91□□□□□ -0.18
HMGB2-201ENST00000296503 MYCLP12524 364 aaPredicted RBP13.91□□□□□ -0.18
HMGB2-201ENST00000296503 SMARCC2Q8TAQ2 1214 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 GPKOWQ92917 476 aaPredicted RBP eCLIP13.91□□□□□ -0.18
HMGB2-201ENST00000296503 FERMT2Q96AC1 680 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 WDR11Q9BZH6 1224 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 AP5M1Q9H0R1 490 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 PSTPIP2Q9H939 334 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 PXMP2Q9NR77 195 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 CNTNAP5Q8WYK1 1306 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 LCTP09848 1927 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 DYNC1LI2O43237 492 aaPredicted RBP13.91□□□□□ -0.18
HMGB2-201ENST00000296503 ADCY6O43306 1168 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 EVI5O60447 810 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 NR3C2P08235 984 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 COL6A1P12109 1028 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 SMPD1P17405 629 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 EDNRBP24530 442 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 EVCP57679 992 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 AKAP17AQ02040 695 aaKnown RBP13.91□□□□□ -0.18
HMGB2-201ENST00000296503 GHRHRQ02643 423 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 FUT2Q10981 343 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 USP17L6PQ6QN14 398 aa13.91□□□□□ -0.18
HMGB2-201ENST00000296503 ZNF274Q96GC6 653 aaPredicted RBP13.91□□□□□ -0.18
HMGB2-201ENST00000296503 SYNRGQ9UMZ2 1314 aa13.9□□□□□ -0.18
HMGB2-201ENST00000296503 ADAMTS4O75173 837 aa13.9□□□□□ -0.18
HMGB2-201ENST00000296503 ATN1P54259 1190 aaPredicted RBP13.9□□□□□ -0.18
HMGB2-201ENST00000296503 STK3Q13188 491 aa13.9□□□□□ -0.18
HMGB2-201ENST00000296503 GNASQ5JWF2 1037 aa13.9□□□□□ -0.18
HMGB2-201ENST00000296503 TMEM63BQ5T3F8 832 aa13.9□□□□□ -0.18
HMGB2-201ENST00000296503 SEPT14Q6ZU15 432 aa13.9□□□□□ -0.18
HMGB2-201ENST00000296503 NCOA5Q9HCD5 579 aaKnown RBP13.9□□□□□ -0.18
HMGB2-201ENST00000296503 NR2E3Q9Y5X4 410 aa13.9□□□□□ -0.18
HMGB2-201ENST00000296503 NAPAP54920 295 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 GJA9P57773 515 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 IRX5P78411 483 aaPredicted RBP13.89□□□□□ -0.19
HMGB2-201ENST00000296503 KCNA10Q16322 511 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 SCFD2Q8WU76 684 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 VTI1AQ96AJ9 217 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 PDCD2LQ9BRP1 358 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 TNRC18O15417 2968 aaPredicted RBP13.89□□□□□ -0.19
HMGB2-201ENST00000296503 FRMPD3Q5JV73 1810 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 RBM47A0AV96 593 aaKnown RBP13.89□□□□□ -0.19
HMGB2-201ENST00000296503 CPLX1O14810 134 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 PPFIA3O75145 1194 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
HMGB2-201ENST00000296503 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
HMGB2-201ENST00000296503 NEK4P51957 841 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 TTLL4Q14679 1199 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 PGM5Q15124 567 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 ANKRD1Q15327 319 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 DUSP28Q4G0W2 176 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 GLIPR1L2Q4G1C9 344 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 WWC2Q6AWC2 1192 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 TLK2Q86UE8 772 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 PCSK9Q8NBP7 692 aaKnown RBP13.89□□□□□ -0.19
HMGB2-201ENST00000296503 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 PHKBQ93100 1093 aa13.89□□□□□ -0.19
HMGB2-201ENST00000296503 TSEN34Q9BSV6 310 aaKnown RBP13.89□□□□□ -0.19
HMGB2-201ENST00000296503 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
HMGB2-201ENST00000296503 GNEQ9Y223 722 aaKnown RBP13.89□□□□□ -0.19
HMGB2-201ENST00000296503 MYADML2A6NDP7 307 aa13.88□□□□□ -0.19
HMGB2-201ENST00000296503 MEIS2O14770 477 aa13.88□□□□□ -0.19
HMGB2-201ENST00000296503 PRPF3O43395 683 aaKnown RBP13.88□□□□□ -0.19
HMGB2-201ENST00000296503 PTGS1P23219 599 aa13.88□□□□□ -0.19
HMGB2-201ENST00000296503 CCND2P30279 289 aa13.88□□□□□ -0.19
HMGB2-201ENST00000296503 BEX3Q00994 111 aa13.88□□□□□ -0.19
HMGB2-201ENST00000296503 CPLX2Q6PUV4 134 aaKnown RBP13.88□□□□□ -0.19
HMGB2-201ENST00000296503 VSIG10LQ86VR7 867 aa13.88□□□□□ -0.19
HMGB2-201ENST00000296503 ZFP91Q96JP5 570 aaPredicted RBP13.88□□□□□ -0.19
HMGB2-201ENST00000296503 SLC26A6Q9BXS9 759 aa13.88□□□□□ -0.19
HMGB2-201ENST00000296503 UPF3AQ9H1J1 476 aaKnown RBP13.88□□□□□ -0.19
HMGB2-201ENST00000296503 RBM27Q9P2N5 1060 aaKnown RBP13.88□□□□□ -0.19
HMGB2-201ENST00000296503 PHF24Q9UPV7 400 aa13.88□□□□□ -0.19
HMGB2-201ENST00000296503 Q9Y3F1 56 aa13.88□□□□□ -0.19
HMGB2-201ENST00000296503 SMCO2A6NFE2 343 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 hCG_1984214I3L0E3 225 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 PIK3CDO00329 1044 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 IFNAR1P17181 557 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 MKI67P46013 3256 aaKnown RBP13.87□□□□□ -0.19
HMGB2-201ENST00000296503 ACLYP53396 1101 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 AK2P54819 239 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 BECN1Q14457 450 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 NTRK3Q16288 839 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 PFKFB3Q16875 520 aaPredicted RBP13.87□□□□□ -0.19
HMGB2-201ENST00000296503 LRRC26Q2I0M4 334 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms